RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 ZNF625Q96I27 306 aaPredicted RBP1.52□□□□□ -2.17
SSB-212ENST00000494051 MANBALQ9NQG1 85 aa1.52□□□□□ -2.17
SSB-212ENST00000494051 SMCO4Q9NRQ5 59 aa1.52□□□□□ -2.17
SSB-212ENST00000494051 MRPL35Q9NZE8 188 aaKnown RBP1.52□□□□□ -2.17
SSB-212ENST00000494051 LCTP09848 1927 aa1.52□□□□□ -2.17
SSB-212ENST00000494051 GOLGA3Q08378 1498 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 IGLC7A0M8Q6 106 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 PDCD5O14737 125 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 CCKP06307 115 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 Q1T7F1 81 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 MPV17LQ2QL34 196 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 C20orf78Q9BR46 151 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 RABAC1Q9UI14 185 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 PSORS1C2Q9UIG4 136 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 LHFPL6Q9Y693 200 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 SPCS1Q9Y6A9 102 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 MGAMO43451 1857 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 USP54Q70EL1 1684 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 ATG2BQ96BY7 2078 aa1.51□□□□□ -2.17
SSB-212ENST00000494051 ERVK-7P63135 1459 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 IFT140Q96RY7 1462 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 CDK12Q9NYV4 1490 aaPredicted RBP1.5□□□□□ -2.17
SSB-212ENST00000494051 PLIN4Q96Q06 1357 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 COL4A2P08572 1712 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 MUC21A0A140T8X8 626 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 C2orf70A6NJV1 201 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 HCG22E2RYF7 251 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 H3BRM9 83 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 NDUFC1O43677 76 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 NUPR1O60356 82 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 TDRG1Q3Y452 100 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 ZNF833PQ6ZTB9 187 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 Q6ZTI0 123 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 C4orf3Q8WVX3 66 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 TSLPQ969D9 159 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 Q9BRP9 147 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 ST20Q9HBF5 79 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 NXT2Q9NPJ8 142 aaKnown RBP1.5□□□□□ -2.17
SSB-212ENST00000494051 ORMDL1Q9P0S3 153 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 FANCMQ8IYD8 2048 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 ZNF638Q14966 1978 aaKnown RBP1.5□□□□□ -2.17
SSB-212ENST00000494051 SLIT2O94813 1529 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 PXDNLA1KZ92 1463 aa1.5□□□□□ -2.17
SSB-212ENST00000494051 CLIP1P30622 1438 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 CASKIN1Q8WXD9 1431 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 ROBO1Q9Y6N7 1651 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 TRAV12-3A0A0B4J271 114 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 TRBV7-7A0A0K0K1E9 115 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 SMIM11AP58511 58 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 C10orf128Q5T292 105 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 LYPD5Q6UWN5 251 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 CYP2G1PQ6ZSU1 146 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 TRGV9Q99603 122 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 TIMM21Q9BVV7 248 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 CYP4F30PQ9H0H9 118 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 LINC00474Q9P2X8 69 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 CACFD1Q9UGQ2 172 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 WNK3Q9BYP7 1800 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 ARAP2Q8WZ64 1704 aa1.49□□□□□ -2.17
SSB-212ENST00000494051 MARF1Q9Y4F3 1742 aaKnown RBP1.49□□□□□ -2.17
SSB-212ENST00000494051 EML6Q6ZMW3 1958 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 SCN8AQ9UQD0 1980 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 MYH6P13533 1939 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 SLX4Q8IY92 1834 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 TRAV23DV6A0A075B6W5 121 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 TRBV6-8A0A0A6YYG3 113 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 A0A0G2JND7 137 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 KANTRA0A1W2PQU2 76 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 CCL16O15467 120 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 C1orf137Q5JT78 98 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 SFTA2Q6UW10 78 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.48□□□□□ -2.17
SSB-212ENST00000494051 C9orf163Q8N9P6 203 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 S100ZQ8WXG8 99 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 IFI27L1Q96BM0 104 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 REG4Q9BYZ8 158 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 ARHGEF12Q9NZN5 1544 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.48□□□□□ -2.17
SSB-212ENST00000494051 PTPRSQ13332 1948 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 EDC4Q6P2E9 1401 aaKnown RBP1.48□□□□□ -2.17
SSB-212ENST00000494051 LRP5O75197 1615 aa1.48□□□□□ -2.17
SSB-212ENST00000494051 LAMC3Q9Y6N6 1575 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 PTPRBP23467 1997 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 SCN9AQ15858 1988 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 GREB1Q4ZG55 1949 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 TRBV10-1A0A0K0K1A3 114 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 A0A1W2PPM0 123 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 SYS1-DBNDD2H3BUS1 97 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 EDDM3BP56851 147 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 PDE6HQ13956 83 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 PMCHL1Q16048 86 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 ETDBQ3ZM63 59 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 CSAG1Q6PB30 78 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 ZNF818PQ6ZRF7 136 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 DEFB119Q8N690 84 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 DMAC1Q96GE9 116 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 CDC42SE1Q9NRR8 79 aa1.47□□□□□ -2.17
SSB-212ENST00000494051 MRPL36Q9P0J6 103 aaKnown RBP1.47□□□□□ -2.17
SSB-212ENST00000494051 PRO2289Q9P1D8 64 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms