RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 FAM74A4Q5TZK3 123 aa15.37■□□□□ 0.05
SNIP1-203ENST00000493916 ATP6V0E2Q8NHE4 81 aa15.37■□□□□ 0.05
SNIP1-203ENST00000493916 SSBP4Q9BWG4 385 aaPredicted RBP15.37■□□□□ 0.05
SNIP1-203ENST00000493916 GTSF1LQ9H1H1 148 aa15.37■□□□□ 0.05
SNIP1-203ENST00000493916 BOLA1Q9Y3E2 137 aa15.37■□□□□ 0.05
SNIP1-203ENST00000493916 KIAA1109Q2LD37 5005 aa15.37■□□□□ 0.05
SNIP1-203ENST00000493916 CRYGDP07320 174 aa15.36■□□□□ 0.05
SNIP1-203ENST00000493916 BLOC1S1P78537 153 aa15.36■□□□□ 0.05
SNIP1-203ENST00000493916 C14orf178Q8N769 122 aaPredicted RBP15.36■□□□□ 0.05
SNIP1-203ENST00000493916 MED9Q9NWA0 146 aa15.36■□□□□ 0.05
SNIP1-203ENST00000493916 A0A087WWL8 130 aa15.35■□□□□ 0.05
SNIP1-203ENST00000493916 TRAV8-6A0A0B4J262 113 aa15.35■□□□□ 0.05
SNIP1-203ENST00000493916 RAB19A4D1S5 217 aa15.35■□□□□ 0.05
SNIP1-203ENST00000493916 LELP1Q5T871 98 aa15.35■□□□□ 0.05
SNIP1-203ENST00000493916 OR10AG1Q8NH19 301 aa15.35■□□□□ 0.05
SNIP1-203ENST00000493916 TRBV20OR9-2A0A075B6H5 130 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 IGHV3-38A0A0C4DH36 116 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 GAGE12JA6NER3 117 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 NKX2-5P52952 324 aaPredicted RBP15.34■□□□□ 0.05
SNIP1-203ENST00000493916 GAGE1Q13065 139 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 GAGE4Q13068 117 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 GAGE5Q13069 117 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 GAGE13Q4V321 117 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 LINC01556Q5JQF7 62 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 NFE4Q86UQ8 179 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 C10orf126Q8N4M7 172 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 LYPD6BQ8NI32 183 aa15.34■□□□□ 0.05
SNIP1-203ENST00000493916 C19orf71A6NCJ1 209 aa15.33■□□□□ 0.04
SNIP1-203ENST00000493916 OR10J3Q5JRS4 329 aa15.33■□□□□ 0.04
SNIP1-203ENST00000493916 DAZAP1Q96EP5 407 aaKnown RBP15.33■□□□□ 0.04
SNIP1-203ENST00000493916 Q9UF83 564 aa15.33■□□□□ 0.04
SNIP1-203ENST00000493916 BIN3Q9NQY0 253 aa15.32■□□□□ 0.04
SNIP1-203ENST00000493916 MSRB1Q9NZV6 116 aa15.32■□□□□ 0.04
SNIP1-203ENST00000493916 RPS20P60866 119 aaKnown RBP15.31■□□□□ 0.04
SNIP1-203ENST00000493916 TRBV10-1A0A0K0K1A3 114 aa15.3■□□□□ 0.04
SNIP1-203ENST00000493916 SPANXN1Q5VSR9 72 aa15.3■□□□□ 0.04
SNIP1-203ENST00000493916 OR2D3Q8NGH3 330 aa15.3■□□□□ 0.04
SNIP1-203ENST00000493916 TNFRSF18Q9Y5U5 241 aa15.3■□□□□ 0.04
SNIP1-203ENST00000493916 RBFOX3A6NFN3 312 aa15.28■□□□□ 0.04
SNIP1-203ENST00000493916 P01737 135 aa15.28■□□□□ 0.04
SNIP1-203ENST00000493916 IGLC6P0CF74 106 aa15.28■□□□□ 0.04
SNIP1-203ENST00000493916 RAB4BP61018 213 aa15.28■□□□□ 0.04
SNIP1-203ENST00000493916 A0A087WWC5 75 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 MUC21A0A0G2JKD1 596 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 MUC21A0A140T8X8 626 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 XKRY2A2RUG3 117 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 C16orf90A8MZG2 172 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 TMEM250H0YL14 139 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 SPATA12Q7Z6I5 190 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 FER1L6-AS1Q8NA97 138 aa15.27■□□□□ 0.04
SNIP1-203ENST00000493916 GZMBP10144 247 aa15.26■□□□□ 0.03
SNIP1-203ENST00000493916 OR10G8Q8NGN5 311 aa15.26■□□□□ 0.03
SNIP1-203ENST00000493916 AP1S3Q96PC3 154 aa15.26■□□□□ 0.03
SNIP1-203ENST00000493916 IBA57-AS1B1ANH7 110 aa15.25■□□□□ 0.03
SNIP1-203ENST00000493916 ERVFC1-1P60608 527 aa15.25■□□□□ 0.03
SNIP1-203ENST00000493916 RPL36AP83881 106 aaKnown RBP15.25■□□□□ 0.03
SNIP1-203ENST00000493916 ZNF56Q15929 161 aa15.25■□□□□ 0.03
SNIP1-203ENST00000493916 RPL36ALQ969Q0 106 aaKnown RBP15.25■□□□□ 0.03
SNIP1-203ENST00000493916 TRBV7-3A0A075B6L6 115 aa15.24■□□□□ 0.03
SNIP1-203ENST00000493916 UBE2D3P61077 147 aa15.24■□□□□ 0.03
SNIP1-203ENST00000493916 UBE2D2P62837 147 aa15.24■□□□□ 0.03
SNIP1-203ENST00000493916 TPPP3Q9BW30 176 aa15.24■□□□□ 0.03
SNIP1-203ENST00000493916 KIF25-AS1Q9Y6Z4 181 aa15.24■□□□□ 0.03
SNIP1-203ENST00000493916 F2Z2F3 143 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 K7EN84 100 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 NDUFS6O75380 124 aaKnown RBP15.23■□□□□ 0.03
SNIP1-203ENST00000493916 IGHV3-30P01768 117 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 IGHV3-33P01772 117 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 IGHV3-30-3P0DP02 117 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 IGHV3-30-5P0DP03 117 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 CACNG7P62955 275 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 LRP1BQ9NZR2 4599 aa15.23■□□□□ 0.03
SNIP1-203ENST00000493916 SMIM17P0DL12 118 aa15.22■□□□□ 0.03
SNIP1-203ENST00000493916 KRTAP10-2P60368 255 aa15.22■□□□□ 0.03
SNIP1-203ENST00000493916 SSTP61278 116 aa15.22■□□□□ 0.03
SNIP1-203ENST00000493916 LAGE3Q14657 143 aa15.22■□□□□ 0.03
SNIP1-203ENST00000493916 NUDT10Q8NFP7 164 aa15.22■□□□□ 0.03
SNIP1-203ENST00000493916 OCC1Q8TAD7 63 aa15.22■□□□□ 0.03
SNIP1-203ENST00000493916 NUDT11Q96G61 164 aa15.22■□□□□ 0.03
SNIP1-203ENST00000493916 EREGO14944 169 aa15.21■□□□□ 0.03
SNIP1-203ENST00000493916 TOR2AQ5JU69 321 aa15.21■□□□□ 0.03
SNIP1-203ENST00000493916 NEXN-AS1Q8NBZ9 246 aa15.21■□□□□ 0.03
SNIP1-203ENST00000493916 RPP21Q9H633 154 aaKnown RBP15.2■□□□□ 0.02
SNIP1-203ENST00000493916 A0A087WTM6 91 aa15.19■□□□□ 0.02
SNIP1-203ENST00000493916 F5H697 171 aa15.19■□□□□ 0.02
SNIP1-203ENST00000493916 CTRLP40313 264 aa15.19■□□□□ 0.02
SNIP1-203ENST00000493916 LYZL1Q6UWQ5 148 aa15.19■□□□□ 0.02
SNIP1-203ENST00000493916 FAM210AQ96ND0 272 aa15.19■□□□□ 0.02
SNIP1-203ENST00000493916 RNASE7Q9H1E1 156 aaKnown RBP15.19■□□□□ 0.02
SNIP1-203ENST00000493916 DNAH5Q8TE73 4624 aa15.19■□□□□ 0.02
SNIP1-203ENST00000493916 RYR1P21817 5038 aa15.18■□□□□ 0.02
SNIP1-203ENST00000493916 WDR73Q6P4I2 378 aa15.18■□□□□ 0.02
SNIP1-203ENST00000493916 Q8N3U1 123 aa15.18■□□□□ 0.02
SNIP1-203ENST00000493916 EIF5A2Q9GZV4 153 aaKnown RBP15.18■□□□□ 0.02
SNIP1-203ENST00000493916 CNFNQ9BYD5 112 aa15.17■□□□□ 0.02
SNIP1-203ENST00000493916 NIT1Q86X76 327 aa15.16■□□□□ 0.02
SNIP1-203ENST00000493916 Q9HAA7 133 aa15.16■□□□□ 0.02
SNIP1-203ENST00000493916 PGPEP1Q9NXJ5 209 aa15.16■□□□□ 0.02
SNIP1-203ENST00000493916 CDK2AP2O75956 126 aa15.15■□□□□ 0.02
SNIP1-203ENST00000493916 TRGC1P0CF51 173 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms