RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 MSRB1Q9NZV6 116 aa7.21□□□□□ -1.26
COL6A3-214ENST00000493608 Q9UF83 564 aa7.21□□□□□ -1.26
COL6A3-214ENST00000493608 LRP1BQ9NZR2 4599 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 GAGE12JA6NER3 117 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 A8MWV9 139 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 CIDEAO60543 219 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 LTAP01374 205 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 MGST1P10620 155 aaKnown RBP7.2□□□□□ -1.26
COL6A3-214ENST00000493608 CCL20P78556 96 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 GAGE1Q13065 139 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 GAGE4Q13068 117 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 GAGE5Q13069 117 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 ZNF674Q2M3X9 581 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 GAGE13Q4V321 117 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 OR10J3Q5JRS4 329 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 COX8CQ7Z4L0 72 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 SH2D6Q7Z4S9 175 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 C14orf178Q8N769 122 aaPredicted RBP7.2□□□□□ -1.26
COL6A3-214ENST00000493608 ATP6V0E2Q8NHE4 81 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 IL36BQ9NZH7 164 aa7.2□□□□□ -1.26
COL6A3-214ENST00000493608 TRAV8-6A0A0B4J262 113 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 IGHV3-38A0A0C4DH36 116 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 TRBV6-1A0A0K0K1D8 114 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 M0R381 172 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 IGHV3-33P01772 117 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 IGHV3-30-3P0DP02 117 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 TPT1P13693 172 aaKnown RBP7.19□□□□□ -1.26
COL6A3-214ENST00000493608 RPL19P84098 196 aaKnown RBP7.19□□□□□ -1.26
COL6A3-214ENST00000493608 FAM74A4Q5TZK3 123 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 UFSP1Q6NVU6 142 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 PHLDA3Q9Y5J5 127 aa7.19□□□□□ -1.26
COL6A3-214ENST00000493608 A0A087WWL8 130 aa7.18□□□□□ -1.26
COL6A3-214ENST00000493608 TIRAPP58753 221 aa7.18□□□□□ -1.26
COL6A3-214ENST00000493608 EIF5AP63241 154 aaKnown RBP7.18□□□□□ -1.26
COL6A3-214ENST00000493608 DNLZQ5SXM8 178 aa7.18□□□□□ -1.26
COL6A3-214ENST00000493608 LELP1Q5T871 98 aa7.18□□□□□ -1.26
COL6A3-214ENST00000493608 ZFP2Q6ZN57 461 aa7.18□□□□□ -1.26
COL6A3-214ENST00000493608 TCEAL7Q9BRU2 100 aa7.18□□□□□ -1.26
COL6A3-214ENST00000493608 GTSF1LQ9H1H1 148 aa7.18□□□□□ -1.26
COL6A3-214ENST00000493608 DNAH5Q8TE73 4624 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 RYR1P21817 5038 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 A0A087WTM6 91 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 MUC21A0A0G2JKD1 596 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 MUC21A0A140T8X8 626 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 ERVFC1-1P60608 527 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 SSTP61278 116 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 PIK3CD-AS1Q5SR53 167 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 PRR27Q6MZM9 219 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 BAGE2Q86Y30 109 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 Q9HAA7 133 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 GNG13Q9P2W3 67 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 HSPG2P98160 4391 aa7.17□□□□□ -1.26
COL6A3-214ENST00000493608 CDK2AP2O75956 126 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 S100A9P06702 114 aaKnown RBP7.16□□□□□ -1.26
COL6A3-214ENST00000493608 LINC01556Q5JQF7 62 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 C10orf126Q8N4M7 172 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 MAPKAPK5-AS1Q8N8E1 139 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 SFRP2Q96HF1 295 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 DERL1Q9BUN8 251 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 MLST8Q9BVC4 326 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 SCRT2Q9NQ03 307 aa7.16□□□□□ -1.26
COL6A3-214ENST00000493608 hCG_2014768A0A024R1R8 64 aa7.15□□□□□ -1.26
COL6A3-214ENST00000493608 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
COL6A3-214ENST00000493608 K7EP13 123 aa7.15□□□□□ -1.26
COL6A3-214ENST00000493608 PSCAO43653 123 aa7.15□□□□□ -1.26
COL6A3-214ENST00000493608 RPL35P42766 123 aaKnown RBP7.15□□□□□ -1.26
COL6A3-214ENST00000493608 ZFP82Q8N141 532 aa7.15□□□□□ -1.26
COL6A3-214ENST00000493608 RHODO00212 210 aa7.14□□□□□ -1.27
COL6A3-214ENST00000493608 LINC00694P0DN24 101 aa7.14□□□□□ -1.27
COL6A3-214ENST00000493608 SULT1A2P50226 295 aa7.14□□□□□ -1.27
COL6A3-214ENST00000493608 TCTE3Q8IZS6 198 aa7.14□□□□□ -1.27
COL6A3-214ENST00000493608 OR10AG1Q8NH19 301 aa7.14□□□□□ -1.27
COL6A3-214ENST00000493608 ANAPC16Q96DE5 110 aa7.14□□□□□ -1.27
COL6A3-214ENST00000493608 MANBALQ9NQG1 85 aa7.14□□□□□ -1.27
COL6A3-214ENST00000493608 TRAV1-1A0A0B4J248 108 aa7.13□□□□□ -1.27
COL6A3-214ENST00000493608 RAB19A4D1S5 217 aa7.13□□□□□ -1.27
COL6A3-214ENST00000493608 EIF5AL1Q6IS14 154 aaKnown RBP7.13□□□□□ -1.27
COL6A3-214ENST00000493608 Q6ZNX1 250 aa7.13□□□□□ -1.27
COL6A3-214ENST00000493608 DAZ4Q86SG3 579 aaKnown RBP7.13□□□□□ -1.27
COL6A3-214ENST00000493608 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
COL6A3-214ENST00000493608 DAZ3Q9NR90 486 aaKnown RBP7.13□□□□□ -1.27
COL6A3-214ENST00000493608 APOBP04114 4563 aaKnown RBP7.12□□□□□ -1.27
COL6A3-214ENST00000493608 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 C1QBP02746 253 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 GZMBP10144 247 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 RAB5CP51148 216 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 KRTAP10-1P60331 282 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 CENPWQ5EE01 88 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 PCLOQ9Y6V0 5065 aa7.12□□□□□ -1.27
COL6A3-214ENST00000493608 TEX46H3BTG2 121 aa7.11□□□□□ -1.27
COL6A3-214ENST00000493608 ZNF56Q15929 161 aa7.11□□□□□ -1.27
COL6A3-214ENST00000493608 SPANXN1Q5VSR9 72 aa7.11□□□□□ -1.27
COL6A3-214ENST00000493608 SLC51BQ86UW2 128 aa7.11□□□□□ -1.27
COL6A3-214ENST00000493608 C11orf52Q96A22 123 aa7.11□□□□□ -1.27
COL6A3-214ENST00000493608 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
COL6A3-214ENST00000493608 A0A087WWC5 75 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms