RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 SACSQ9NZJ4 4579 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 LOC100131303A0A0U1RQF7 123 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 A8MWL6 223 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 K7EQD1 137 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 CRYGDP07320 174 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 CTRLP40313 264 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 CACNG7P62955 275 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 CT83Q5H943 113 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 Q6ZSN1 163 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 GTSF1Q8WW33 167 aa11.7□□□□□ -0.54
RER1-208ENST00000493207 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
RER1-208ENST00000493207 MRPL23Q16540 153 aaKnown RBP11.69□□□□□ -0.54
RER1-208ENST00000493207 UQCC3Q6UW78 93 aa11.69□□□□□ -0.54
RER1-208ENST00000493207 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
RER1-208ENST00000493207 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
RER1-208ENST00000493207 V9GYV3 84 aa11.69□□□□□ -0.54
RER1-208ENST00000493207 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 SRIP30626 198 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 CCL18P55774 89 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 RHOHQ15669 191 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 RNF212Q495C1 297 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 C14orf178Q8N769 122 aaPredicted RBP11.68□□□□□ -0.54
RER1-208ENST00000493207 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 TSKUQ8WUA8 353 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 AP1S3Q96PC3 154 aa11.68□□□□□ -0.54
RER1-208ENST00000493207 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
RER1-208ENST00000493207 NTF3P20783 257 aa11.67□□□□□ -0.54
RER1-208ENST00000493207 ZNF56Q15929 161 aa11.67□□□□□ -0.54
RER1-208ENST00000493207 ESRGQ1W209 222 aa11.67□□□□□ -0.54
RER1-208ENST00000493207 PGLYRP4Q96LB8 373 aa11.67□□□□□ -0.54
RER1-208ENST00000493207 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
RER1-208ENST00000493207 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
RER1-208ENST00000493207 TWIST1Q15672 202 aa11.66□□□□□ -0.54
RER1-208ENST00000493207 WDR73Q6P4I2 378 aa11.66□□□□□ -0.54
RER1-208ENST00000493207 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
RER1-208ENST00000493207 CNFNQ9BYD5 112 aa11.66□□□□□ -0.54
RER1-208ENST00000493207 VPS13DQ5THJ4 4388 aa11.66□□□□□ -0.54
RER1-208ENST00000493207 GFRA4Q9GZZ7 299 aa11.65□□□□□ -0.54
RER1-208ENST00000493207 RYR2Q92736 4967 aa11.65□□□□□ -0.55
RER1-208ENST00000493207 TMEM218A2RU14 115 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 F5H697 171 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 ADCYAP1P18509 176 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
RER1-208ENST00000493207 RAB4BP61018 213 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 Q9UF83 564 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 KIF25-AS1Q9Y6Z4 181 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 RYR3Q15413 4870 aa11.64□□□□□ -0.55
RER1-208ENST00000493207 KMT2AQ03164 3969 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 FAM231BA6NCW3 169 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 F8W036 122 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 MGPP08493 103 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 EVI2AP22794 236 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 FAM3BP58499 235 aaPredicted RBP11.63□□□□□ -0.55
RER1-208ENST00000493207 PNRC1Q12796 327 aaPredicted RBP11.63□□□□□ -0.55
RER1-208ENST00000493207 GAGE1Q13065 139 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 GAGE4Q13068 117 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 GAGE5Q13069 117 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 LYPD5Q6UWN5 251 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
RER1-208ENST00000493207 LINC00315P59091 139 aa11.62□□□□□ -0.55
RER1-208ENST00000493207 SH2D6Q7Z4S9 175 aa11.62□□□□□ -0.55
RER1-208ENST00000493207 NUP35Q8NFH5 326 aa11.61□□□□□ -0.55
RER1-208ENST00000493207 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
RER1-208ENST00000493207 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
RER1-208ENST00000493207 NAT8BQ9UHF3 227 aa11.61□□□□□ -0.55
RER1-208ENST00000493207 MRPS16Q9Y3D3 137 aaKnown RBP11.61□□□□□ -0.55
RER1-208ENST00000493207 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
RER1-208ENST00000493207 A0A1B0GUT8 65 aa11.6□□□□□ -0.55
RER1-208ENST00000493207 SMIM27A0A1W2PRY6 76 aa11.6□□□□□ -0.55
RER1-208ENST00000493207 TRBV10-1A0A0K0K1A3 114 aa11.59□□□□□ -0.55
RER1-208ENST00000493207 PPP1R2P9O14990 202 aa11.59□□□□□ -0.55
RER1-208ENST00000493207 LINC00694P0DN24 101 aa11.59□□□□□ -0.55
RER1-208ENST00000493207 SMIM15Q7Z3B0 74 aa11.59□□□□□ -0.55
RER1-208ENST00000493207 ATP6V0E2Q8NHE4 81 aa11.59□□□□□ -0.55
RER1-208ENST00000493207 UPK3BQ9BT76 320 aa11.59□□□□□ -0.55
RER1-208ENST00000493207 SEC11CQ9BY50 192 aa11.59□□□□□ -0.55
RER1-208ENST00000493207 M0R2N4 97 aa11.58□□□□□ -0.56
RER1-208ENST00000493207 RPL36AP83881 106 aaKnown RBP11.58□□□□□ -0.56
RER1-208ENST00000493207 SUMO4Q6EEV6 95 aa11.58□□□□□ -0.56
RER1-208ENST00000493207 RPL36ALQ969Q0 106 aaKnown RBP11.58□□□□□ -0.56
RER1-208ENST00000493207 Q9H8V8 135 aa11.58□□□□□ -0.56
RER1-208ENST00000493207 MT-ND4LP03901 98 aa11.57□□□□□ -0.56
RER1-208ENST00000493207 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
RER1-208ENST00000493207 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
RER1-208ENST00000493207 GTSF1LQ9H1H1 148 aa11.57□□□□□ -0.56
RER1-208ENST00000493207 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
RER1-208ENST00000493207 RIGQ13278 110 aa11.56□□□□□ -0.56
RER1-208ENST00000493207 DNAH6Q9C0G6 4158 aa11.56□□□□□ -0.56
RER1-208ENST00000493207 H7C1H1 209 aa11.55□□□□□ -0.56
RER1-208ENST00000493207 M0QY20 66 aa11.55□□□□□ -0.56
RER1-208ENST00000493207 TIRAPP58753 221 aa11.55□□□□□ -0.56
RER1-208ENST00000493207 UBE2D3P61077 147 aa11.55□□□□□ -0.56
RER1-208ENST00000493207 UBE2D2P62837 147 aa11.55□□□□□ -0.56
RER1-208ENST00000493207 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
RER1-208ENST00000493207 SIVA1O15304 175 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms