RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RBMY1A1P0DJD3 496 aaKnown RBP10.3□□□□□ -0.76
PDZRN3-210ENST00000492909 RBMY1CP0DJD4 496 aa10.3□□□□□ -0.76
PDZRN3-210ENST00000492909 RBMY1FQ15415 496 aaKnown RBP10.3□□□□□ -0.76
PDZRN3-210ENST00000492909 IGHV1OR15-1A0A075B7D0 117 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 DLEU1O43261 78 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 ASIPP42127 132 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 GAGE1Q13065 139 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 PET117Q6UWS5 81 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 HSPB8Q9UJY1 196 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 TMEM208Q9BTX3 173 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 MAP1LC3CQ9BXW4 147 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 TMEM191AQ9H0A3 160 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 ST20Q9HBF5 79 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 U3KQK5 164 aa10.29□□□□□ -0.76
PDZRN3-210ENST00000492909 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
PDZRN3-210ENST00000492909 GNRH2O43555 120 aa10.28□□□□□ -0.76
PDZRN3-210ENST00000492909 KRTAP10-11P60412 298 aa10.28□□□□□ -0.76
PDZRN3-210ENST00000492909 H3BVH4 76 aa10.27□□□□□ -0.77
PDZRN3-210ENST00000492909 GIG44P09565 113 aaPredicted RBP10.27□□□□□ -0.77
PDZRN3-210ENST00000492909 STPG4Q8N801 248 aa10.27□□□□□ -0.77
PDZRN3-210ENST00000492909 LINC01587Q99440 93 aa10.27□□□□□ -0.77
PDZRN3-210ENST00000492909 CSTL1Q9H114 145 aa10.27□□□□□ -0.77
PDZRN3-210ENST00000492909 SNAI2O43623 268 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 SAMD5Q5TGI4 173 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 FAM104BQ5XKR9 115 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 FA2HQ7L5A8 372 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 CNFNQ9BYD5 112 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 AP5S1Q9NUS5 200 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 CBY3A6NI87 242 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 MED14OSP0DP75 135 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 HTN1P15515 57 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 C1orf158Q8N1D5 194 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 PRSS3P2Q8NHM4 247 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 LINC00467Q9BRT7 94 aa10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 TIMM8BQ9Y5J9 83 aaPredicted RBP10.26□□□□□ -0.77
PDZRN3-210ENST00000492909 MUC21A0A0G2JKD1 596 aa10.25□□□□□ -0.77
PDZRN3-210ENST00000492909 MUC21A0A140T8X8 626 aa10.25□□□□□ -0.77
PDZRN3-210ENST00000492909 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
PDZRN3-210ENST00000492909 OR10AG1Q8NH19 301 aa10.25□□□□□ -0.77
PDZRN3-210ENST00000492909 GOLT1BQ9Y3E0 138 aa10.25□□□□□ -0.77
PDZRN3-210ENST00000492909 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 IGHV3-16A0A0C4DH30 117 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 D6R8Y8 96 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 IGHV4-30-4P0DP06 118 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 LINC01545Q5VT33 79 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 CSNK1G2-AS1Q8NCQ2 148 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 NOTCH1P46531 2555 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 hDV102S1A0JD36 115 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 PRB2P02812 416 aaPredicted RBP10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 APOC4P55056 127 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 CACNG7P62955 275 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 TWIST1Q15672 202 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 MRPL51Q4U2R6 128 aaKnown RBP10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 SPANXN1Q5VSR9 72 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 AMN1Q8IY45 258 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 ORMDL3Q8N138 153 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 KIR2DL5BQ8NHK3 375 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 SCRT2Q9NQ03 307 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 MDFICQ9P1T7 246 aa10.24□□□□□ -0.77
PDZRN3-210ENST00000492909 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
PDZRN3-210ENST00000492909 HINT1P49773 126 aaPredicted RBP10.23□□□□□ -0.77
PDZRN3-210ENST00000492909 MUC4Q99102 2169 aa10.23□□□□□ -0.77
PDZRN3-210ENST00000492909 IGHV4-4A0A075B6R2 117 aa10.22□□□□□ -0.77
PDZRN3-210ENST00000492909 NPSP0C0P6 89 aa10.22□□□□□ -0.77
PDZRN3-210ENST00000492909 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
PDZRN3-210ENST00000492909 PRM2P04554 102 aa10.21□□□□□ -0.77
PDZRN3-210ENST00000492909 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.77
PDZRN3-210ENST00000492909 A0A096LNJ9 63 aa10.21□□□□□ -0.78
PDZRN3-210ENST00000492909 M0R381 172 aa10.21□□□□□ -0.78
PDZRN3-210ENST00000492909 ZNF415Q09FC8 603 aa10.21□□□□□ -0.78
PDZRN3-210ENST00000492909 SLC25A34Q6PIV7 304 aa10.21□□□□□ -0.78
PDZRN3-210ENST00000492909 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
PDZRN3-210ENST00000492909 A8MZ25 164 aa10.2□□□□□ -0.78
PDZRN3-210ENST00000492909 SPRY2O43597 315 aa10.2□□□□□ -0.78
PDZRN3-210ENST00000492909 ORAOV1Q8WV07 137 aa10.2□□□□□ -0.78
PDZRN3-210ENST00000492909 H0Y8G0 127 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 NXPH4O95158 308 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 CKS2P33552 79 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 FBN3Q75N90 2809 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 NCR2O95944 276 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 AZU1P20160 251 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 KPRPQ5T749 579 aaPredicted RBP10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 SMIM15Q7Z3B0 74 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 C11orf72Q8NBR9 251 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 SYT8Q8NBV8 401 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 TMEM263Q8WUH6 116 aaKnown RBP10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 RNF185Q96GF1 192 aa10.19□□□□□ -0.78
PDZRN3-210ENST00000492909 DNAH3Q8TD57 4116 aa10.18□□□□□ -0.78
PDZRN3-210ENST00000492909 NPYP01303 97 aa10.18□□□□□ -0.78
PDZRN3-210ENST00000492909 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
PDZRN3-210ENST00000492909 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
PDZRN3-210ENST00000492909 SPXQ9BT56 116 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms