RNA–Protein interactions for RNA: ENST00000492809.5

PCBP4-215, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-215	ENST00000492809	MOB4	Q9Y3A3	225 aa		11.19	□□□□□ -0.62
PCBP4-215	ENST00000492809	TRAV21	A0A0B4J279	112 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809		C9JAW5	83 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	RPL32	P62910	135 aa	Known RBP	11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	IGHV3-49	A0A0A0MS15	119 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	TRAV41	A0A0B4J266	112 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	SPRY2	O43597	315 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	CRIP2	P52943	208 aa	Predicted RBP	11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	TSPEAR-AS2	P59090	65 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	TMEM219	Q86XT9	240 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	POM121L12	Q8N7R1	296 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	TMEM141	Q96I45	108 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	LINC00477	Q96M19	166 aa		11.18	□□□□□ -0.62
PCBP4-215	ENST00000492809	MED13L	Q71F56	2210 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	IGHV4-39	P01824	125 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	IGF1	P05019	195 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	C16orf92	Q96LL3	132 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	AMELX	Q99217	191 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	PRORY	Q9H606	182 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	SPTBN1	Q01082	2364 aa	Known RBP	11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	FAM223B	A6NKX1	122 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	SNCG	O76070	127 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	NDUFV3	P56181	108 aa	Known RBP	11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	FAM223A	Q8IWN6	122 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	ZFAND2A	Q8N6M9	145 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	TP53TG1	Q9Y2A0	90 aa		11.17	□□□□□ -0.62
PCBP4-215	ENST00000492809	IGHV3-33	P01772	117 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809		P0DMU3	169 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809	FAM231A	P0DMU4	169 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809	FAM231C	P0DMU5	169 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809	EMP1	P54849	157 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809	IGHV1-69	P01742	117 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809		Q6Q795	121 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809	C9orf139	Q6ZV77	190 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809	LINC01600	Q96MT4	127 aa		11.16	□□□□□ -0.62
PCBP4-215	ENST00000492809	IGHV4OR15-8	A0A075B7B6	117 aa		11.15	□□□□□ -0.62
PCBP4-215	ENST00000492809	IGHV3OR16-10	A0A075B7F0	116 aa		11.15	□□□□□ -0.62
PCBP4-215	ENST00000492809		A0A087WW49	117 aa		11.15	□□□□□ -0.62
PCBP4-215	ENST00000492809		J3QQQ9	107 aa		11.15	□□□□□ -0.62
PCBP4-215	ENST00000492809	TMEM170B	Q5T4T1	132 aa		11.15	□□□□□ -0.62
PCBP4-215	ENST00000492809	TIMM17A	Q99595	171 aa		11.15	□□□□□ -0.62
PCBP4-215	ENST00000492809	GAGE12J	A6NER3	117 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	GAGE7	O76087	117 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	GAGE12F	P0CL80	117 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	GAGE12G	P0CL81	117 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	GAGE12I	P0CL82	117 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	GNLY	P22749	145 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	GAGE4	Q13068	117 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	ANXA2R	Q3ZCQ2	193 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	TRPT1	Q86TN4	253 aa	Known RBP	11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	TMEM263	Q8WUH6	116 aa	Known RBP	11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	RAX2	Q96IS3	184 aa		11.15	□□□□□ -0.63
PCBP4-215	ENST00000492809	TRAV4	A0A0B4J268	109 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809		A4D1N5	150 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	LGALS3	P17931	250 aa	Known RBP	11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	C20orf173	Q96LM9	149 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	LINC00527	Q9UJ94	153 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809		A0A0B4J2C4	111 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	POLR2K	P53803	58 aa	Known RBP	11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	ZNF876P	Q49A33	203 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	TTC32	Q5I0X7	151 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809		Q8N1Y9	231 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	ZNRF2	Q8NHG8	242 aa		11.14	□□□□□ -0.63
PCBP4-215	ENST00000492809	ABCA2	Q9BZC7	2435 aa		11.13	□□□□□ -0.63
PCBP4-215	ENST00000492809	IFITM1	P13164	125 aa		11.13	□□□□□ -0.63
PCBP4-215	ENST00000492809	OVOL1	O14753	267 aa		11.13	□□□□□ -0.63
PCBP4-215	ENST00000492809	ARL3	P36405	182 aa		11.13	□□□□□ -0.63
PCBP4-215	ENST00000492809	OR10J6P	Q8NGY7	276 aa		11.13	□□□□□ -0.63
PCBP4-215	ENST00000492809	NTN5	Q8WTR8	489 aa	Predicted RBP	11.13	□□□□□ -0.63
PCBP4-215	ENST00000492809	VCY	O14598	125 aa		11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	EIF4EBP3	O60516	100 aa	Predicted RBP	11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	CRLF1	O75462	422 aa		11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	LINC00315	P59091	139 aa		11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	ATXN8	Q156A1	80 aa		11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	BRD3OS	Q6XYD6	125 aa		11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	KIF25-AS1	Q9Y6Z4	181 aa		11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	NXPH4	O95158	308 aa		11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	RNASE3	P12724	160 aa	Known RBP	11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	RPL13A	P40429	203 aa	Known RBP	11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	RPL39	P62891	51 aa	Known RBP	11.12	□□□□□ -0.63
PCBP4-215	ENST00000492809	IGHV4-61	A0A0C4DH41	118 aa		11.11	□□□□□ -0.63
PCBP4-215	ENST00000492809	GNRH2	O43555	120 aa		11.11	□□□□□ -0.63
PCBP4-215	ENST00000492809	PIMREG	Q9BSJ6	248 aa		11.11	□□□□□ -0.63
PCBP4-215	ENST00000492809	LEPROT	O15243	131 aa		11.11	□□□□□ -0.63
PCBP4-215	ENST00000492809	BRI3	O95415	125 aa		11.11	□□□□□ -0.63
PCBP4-215	ENST00000492809	LINC01620	Q4KN68	170 aa		11.11	□□□□□ -0.63
PCBP4-215	ENST00000492809	SPANXA1	Q9NS26	97 aa		11.11	□□□□□ -0.63
PCBP4-215	ENST00000492809	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	NDUFA4	O00483	81 aa		11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	TRBV12-3	P01733	135 aa		11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	FAM19A4	Q96LR4	140 aa		11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	CCDC179	H3BU77	68 aa		11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	RNASE4	P34096	147 aa	Known RBP	11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	UNQ9165/PRO28630	Q6UXU0	137 aa		11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	APRG1	Q8IVJ8	170 aa		11.1	□□□□□ -0.63
PCBP4-215	ENST00000492809	TRAV8-4	A0A0B4J246	113 aa		11.09	□□□□□ -0.63
PCBP4-215	ENST00000492809	MUSTN1	Q8IVN3	82 aa		11.09	□□□□□ -0.63
PCBP4-215	ENST00000492809	C10orf105	Q8TEF2	133 aa		11.09	□□□□□ -0.63
PCBP4-215	ENST00000492809	ODF3	Q96PU9	254 aa		11.09	□□□□□ -0.63
PCBP4-215	ENST00000492809	CACNA1B	Q00975	2339 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms