RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 K7EQM0 130 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 ARPC5O15511 151 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 CRPP02741 224 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 PET100P0DJ07 73 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 S100A1P23297 94 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 ASIPP42127 132 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 ZNF345Q14585 488 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 DGAT2L7PQ6IED9 249 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 UFSP1Q6NVU6 142 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 TEX261Q6UWH6 196 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 TMUB2Q71RG4 321 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 C9orf163Q8N9P6 203 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 OR2G3Q8NGZ4 309 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 PPP1R1CQ8WVI7 109 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 ZC2HC1AQ96GY0 325 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 PSG8Q9UQ74 426 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 TMEM262E9PQX1 116 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 H0YIZ8 118 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 RHODO00212 210 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 MPC2O95563 127 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 HLA-DQA1P01909 254 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 TCRAP04437 139 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 PRNTQ86SH4 94 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 C5orf17Q8NAS9 161 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 TNFSF18Q9UNG2 199 aa8.8□□□□□ -1
GPNMB-213ENST00000492512 PANO1I0J062 215 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 HMGB3O15347 200 aaKnown RBP8.79□□□□□ -1
GPNMB-213ENST00000492512 PRSS1P07477 247 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 FLI1Q01543 452 aaPredicted RBP8.79□□□□□ -1
GPNMB-213ENST00000492512 FAM74A4Q5TZK3 123 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 ENHOQ6UWT2 76 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 SLC51BQ86UW2 128 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 KCNRGQ8N5I3 272 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 INO80EQ8NBZ0 244 aaPredicted RBP8.79□□□□□ -1
GPNMB-213ENST00000492512 OR10G7Q8NGN6 311 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 DPH3P1Q9H4G8 78 aa8.79□□□□□ -1
GPNMB-213ENST00000492512 IGKV3D-20A0A0C4DH25 116 aa8.78□□□□□ -1
GPNMB-213ENST00000492512 KANTRA0A1W2PQU2 76 aa8.78□□□□□ -1
GPNMB-213ENST00000492512 RAB14P61106 215 aa8.78□□□□□ -1
GPNMB-213ENST00000492512 C15orf54Q8N8G6 183 aa8.78□□□□□ -1
GPNMB-213ENST00000492512 HSD17B11Q8NBQ5 300 aa8.78□□□□□ -1
GPNMB-213ENST00000492512 IL36BQ9NZH7 164 aa8.78□□□□□ -1
GPNMB-213ENST00000492512 BCL2L11O43521 198 aa8.77□□□□□ -1.01
GPNMB-213ENST00000492512 ARL14EPLP0DKL9 152 aa8.77□□□□□ -1.01
GPNMB-213ENST00000492512 RAB2AP61019 212 aa8.77□□□□□ -1.01
GPNMB-213ENST00000492512 RPL36AP83881 106 aaKnown RBP8.77□□□□□ -1.01
GPNMB-213ENST00000492512 RPL19P84098 196 aaKnown RBP8.77□□□□□ -1.01
GPNMB-213ENST00000492512 SAPCD1Q5SSQ6 148 aa8.77□□□□□ -1.01
GPNMB-213ENST00000492512 RPL36ALQ969Q0 106 aaKnown RBP8.77□□□□□ -1.01
GPNMB-213ENST00000492512 SMIM3Q9BZL3 60 aa8.77□□□□□ -1.01
GPNMB-213ENST00000492512 H3BVH4 76 aa8.76□□□□□ -1.01
GPNMB-213ENST00000492512 ANGP03950 147 aaKnown RBP8.76□□□□□ -1.01
GPNMB-213ENST00000492512 CLLU1Q5K131 121 aa8.76□□□□□ -1.01
GPNMB-213ENST00000492512 SDIM1Q6ZPB5 146 aa8.76□□□□□ -1.01
GPNMB-213ENST00000492512 A0A087WWL8 130 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 TRBV10-1A0A0K0K1A3 114 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 LINC00862A6NCI5 91 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 FABP5P3A8MUU1 101 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 UBE2D3P61077 147 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 UBE2D2P62837 147 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
GPNMB-213ENST00000492512 MIAQ16674 131 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 MPV17L2Q567V2 206 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 SLC7A5P1Q8MH63 180 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 EPDR1Q9UM22 224 aa8.75□□□□□ -1.01
GPNMB-213ENST00000492512 TRBV7-3A0A075B6L6 115 aa8.74□□□□□ -1.01
GPNMB-213ENST00000492512 B4DEV8 164 aa8.74□□□□□ -1.01
GPNMB-213ENST00000492512 ARMS2P0C7Q2 107 aa8.74□□□□□ -1.01
GPNMB-213ENST00000492512 EIF5AP63241 154 aaKnown RBP8.74□□□□□ -1.01
GPNMB-213ENST00000492512 AQP10Q96PS8 301 aa8.74□□□□□ -1.01
GPNMB-213ENST00000492512 RPL12P30050 165 aaKnown RBP8.73□□□□□ -1.01
GPNMB-213ENST00000492512 CDC34P49427 236 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-213ENST00000492512 SFRP2Q96HF1 295 aa8.73□□□□□ -1.01
GPNMB-213ENST00000492512 PHLDA3Q9Y5J5 127 aa8.73□□□□□ -1.01
GPNMB-213ENST00000492512 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
GPNMB-213ENST00000492512 STAG3L3P0CL85 134 aa8.72□□□□□ -1.01
GPNMB-213ENST00000492512 GCHFRP30047 84 aa8.72□□□□□ -1.01
GPNMB-213ENST00000492512 PKIAP61925 76 aa8.72□□□□□ -1.01
GPNMB-213ENST00000492512 CIRBPQ14011 172 aaKnown RBP8.72□□□□□ -1.01
GPNMB-213ENST00000492512 STOML3Q8TAV4 291 aa8.72□□□□□ -1.01
GPNMB-213ENST00000492512 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
GPNMB-213ENST00000492512 ZNF471Q9BX82 626 aaPredicted RBP8.72□□□□□ -1.01
GPNMB-213ENST00000492512 ARL2-SNX15V9GYD0 113 aa8.72□□□□□ -1.01
GPNMB-213ENST00000492512 A0A087WYN8 130 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 TRAV34A0A0B4J273 112 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 GRIFINA4D1Z8 144 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 M0R036 132 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 M0R381 172 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 TPT1P13693 172 aaKnown RBP8.71□□□□□ -1.02
GPNMB-213ENST00000492512 DNLZQ5SXM8 178 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 CLRN3Q8NCR9 226 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 SUN5Q8TC36 379 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 WFDC1Q9HC57 220 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 MED9Q9NWA0 146 aa8.71□□□□□ -1.02
GPNMB-213ENST00000492512 IGHV3-64A0A075B6Q5 118 aa8.7□□□□□ -1.02
GPNMB-213ENST00000492512 KRBOX1C9JBD0 128 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms