RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 KRTAP29-1A8MX34 341 aaPredicted RBP10.76□□□□□ -0.69
CDK11A-220ENST00000492390 LINC00315P59091 139 aa10.76□□□□□ -0.69
CDK11A-220ENST00000492390 KCNIP4Q6PIL6 250 aa10.76□□□□□ -0.69
CDK11A-220ENST00000492390 Q6ZQT7 251 aa10.76□□□□□ -0.69
CDK11A-220ENST00000492390 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
CDK11A-220ENST00000492390 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
CDK11A-220ENST00000492390 TRAV12-2A0A075B6T6 113 aa10.75□□□□□ -0.69
CDK11A-220ENST00000492390 CRXO43186 299 aaPredicted RBP10.75□□□□□ -0.69
CDK11A-220ENST00000492390 ORM1P02763 201 aa10.75□□□□□ -0.69
CDK11A-220ENST00000492390 RPS20P60866 119 aaKnown RBP10.75□□□□□ -0.69
CDK11A-220ENST00000492390 ELOBQ15370 118 aa10.75□□□□□ -0.69
CDK11A-220ENST00000492390 TRAV9-1A0A075B6T8 112 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 TRAV12-3A0A0B4J271 114 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 IGKV3D-20A0A0C4DH25 116 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 XKRY2A2RUG3 117 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 CXCL1P09341 107 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 TCL1AP56279 114 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
CDK11A-220ENST00000492390 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
CDK11A-220ENST00000492390 TRBV24-1A0A075B6N3 115 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 TMSB15BA0A087X1C1 80 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 HIGD1CA8MV81 97 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 ZNF324O75467 553 aaPredicted RBP10.73□□□□□ -0.69
CDK11A-220ENST00000492390 INSP01308 110 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 PRM2P04554 102 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 GZMBP10144 247 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 ESRGQ1W209 222 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 NAGKQ9UJ70 344 aa10.73□□□□□ -0.69
CDK11A-220ENST00000492390 TGIF2-C20orf24A0A0A6YYL0 155 aa10.72□□□□□ -0.69
CDK11A-220ENST00000492390 PLAC8L1A1L4L8 177 aa10.72□□□□□ -0.69
CDK11A-220ENST00000492390 COLCA2A8K830 154 aa10.72□□□□□ -0.69
CDK11A-220ENST00000492390 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
CDK11A-220ENST00000492390 IGLC6P0CF74 106 aa10.71□□□□□ -0.69
CDK11A-220ENST00000492390 CTRLP40313 264 aa10.71□□□□□ -0.69
CDK11A-220ENST00000492390 FOXA3P55318 350 aaPredicted RBP10.71□□□□□ -0.69
CDK11A-220ENST00000492390 TDRG1Q3Y452 100 aa10.71□□□□□ -0.69
CDK11A-220ENST00000492390 ANXA2RQ3ZCQ2 193 aa10.71□□□□□ -0.69
CDK11A-220ENST00000492390 MUC21Q5SSG8 566 aa10.71□□□□□ -0.69
CDK11A-220ENST00000492390 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.71□□□□□ -0.69
CDK11A-220ENST00000492390 NUP35Q8NFH5 326 aa10.71□□□□□ -0.69
CDK11A-220ENST00000492390 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
CDK11A-220ENST00000492390 GRIFINA4D1Z8 144 aa10.7□□□□□ -0.7
CDK11A-220ENST00000492390 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
CDK11A-220ENST00000492390 FER1L6-AS1Q8NA97 138 aa10.7□□□□□ -0.7
CDK11A-220ENST00000492390 KCNS1Q96KK3 526 aa10.7□□□□□ -0.7
CDK11A-220ENST00000492390 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
CDK11A-220ENST00000492390 TRAV26-1A0A087WT03 109 aa10.69□□□□□ -0.7
CDK11A-220ENST00000492390 TYMSP04818 313 aa10.69□□□□□ -0.7
CDK11A-220ENST00000492390 AZU1P20160 251 aa10.69□□□□□ -0.7
CDK11A-220ENST00000492390 GCSHP23434 173 aa10.69□□□□□ -0.7
CDK11A-220ENST00000492390 DNLZQ5SXM8 178 aa10.69□□□□□ -0.7
CDK11A-220ENST00000492390 PGLYRP4Q96LB8 373 aa10.69□□□□□ -0.7
CDK11A-220ENST00000492390 A0A087WTM6 91 aa10.68□□□□□ -0.7
CDK11A-220ENST00000492390 H3BNG1 76 aa10.68□□□□□ -0.7
CDK11A-220ENST00000492390 RAB5AP20339 215 aa10.68□□□□□ -0.7
CDK11A-220ENST00000492390 ASIPP42127 132 aa10.68□□□□□ -0.7
CDK11A-220ENST00000492390 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
CDK11A-220ENST00000492390 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
CDK11A-220ENST00000492390 TIMM8BQ9Y5J9 83 aaPredicted RBP10.68□□□□□ -0.7
CDK11A-220ENST00000492390 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
CDK11A-220ENST00000492390 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
CDK11A-220ENST00000492390 ATP5L2Q7Z4Y8 100 aa10.67□□□□□ -0.7
CDK11A-220ENST00000492390 TPPP3Q9BW30 176 aa10.67□□□□□ -0.7
CDK11A-220ENST00000492390 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
CDK11A-220ENST00000492390 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
CDK11A-220ENST00000492390 TRGV11A0A075B6L2 103 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 A0A1B0GUT8 65 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 A0A1B0GXF2 115 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 H3BVH4 76 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 GNRH2O43555 120 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 SNAI2O43623 268 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 SPINK4O60575 86 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 MRPL54Q6P161 138 aaKnown RBP10.66□□□□□ -0.7
CDK11A-220ENST00000492390 NFE4Q86UQ8 179 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 BORCS7Q96B45 105 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 TMEM70Q9BUB7 260 aa10.66□□□□□ -0.7
CDK11A-220ENST00000492390 SSBP4Q9BWG4 385 aaPredicted RBP10.66□□□□□ -0.7
CDK11A-220ENST00000492390 IGHV3-16A0A0C4DH30 117 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 A0A0J9YY99 117 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 F2Z2F3 143 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 ARMS2P0C7Q2 107 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 DNAH10OSP0CZ25 163 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.7
CDK11A-220ENST00000492390 S100A4P26447 101 aaKnown RBP10.65□□□□□ -0.7
CDK11A-220ENST00000492390 HAMPP81172 84 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 RASL11AQ6T310 242 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 LINC01587Q99440 93 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 TP53TG3Q9ULZ0 132 aa10.65□□□□□ -0.7
CDK11A-220ENST00000492390 SIVA1O15304 175 aa10.64□□□□□ -0.71
CDK11A-220ENST00000492390 PLA2G1BP04054 148 aaKnown RBP10.64□□□□□ -0.71
CDK11A-220ENST00000492390 HBBP68871 147 aa10.64□□□□□ -0.71
CDK11A-220ENST00000492390 RIGQ13278 110 aa10.64□□□□□ -0.71
CDK11A-220ENST00000492390 ZNF493Q6ZR52 646 aa10.64□□□□□ -0.71
CDK11A-220ENST00000492390 DEFB104AQ8WTQ1 72 aa10.64□□□□□ -0.71
CDK11A-220ENST00000492390 C9orf85Q96MD7 179 aa10.64□□□□□ -0.71
CDK11A-220ENST00000492390 NOP10Q9NPE3 64 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms