RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 B5MCH6 92 aa8.34□□□□□ -1.07
SNED1-211ENST00000491761 SYNJ2BPP57105 145 aa8.34□□□□□ -1.07
SNED1-211ENST00000491761 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
SNED1-211ENST00000491761 KLK9Q9UKQ9 250 aa8.34□□□□□ -1.07
SNED1-211ENST00000491761 VCYO14598 125 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 ZFP36P26651 326 aaKnown RBP8.33□□□□□ -1.08
SNED1-211ENST00000491761 CRIP1P50238 77 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 FXYD2P54710 66 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 SPINK13Q1W4C9 94 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 KLHL30-AS1Q8NEE0 82 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 CHCHD5Q9BSY4 110 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 PAX4O43316 350 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 LGALS9BQ3B8N2 356 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 LGALS9CQ6DKI2 356 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 C11orf71Q6IPW1 123 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 IGHV3-38A0A0C4DH36 116 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 Q8N9W7 124 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 CLUHP3Q96NS8 147 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 EDA2RQ9HAV5 297 aa8.33□□□□□ -1.08
SNED1-211ENST00000491761 MRPS12O15235 138 aaKnown RBP8.32□□□□□ -1.08
SNED1-211ENST00000491761 FGF6P10767 208 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 CDSNQ15517 529 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 ATXN8Q156A1 80 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 TRGV11A0A075B6L2 103 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 DEFB1P60022 68 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 SVEP1Q4LDE5 3571 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 MSMBP08118 114 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 FOXE3Q13461 319 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 EBI3Q14213 229 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 C12orf74Q32Q52 190 aa8.32□□□□□ -1.08
SNED1-211ENST00000491761 ZNF493Q6ZR52 646 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 LINC01356Q8N9X3 169 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 SIRPDQ9H106 197 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 MGAQ8IWI9 3026 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 ZNF292O60281 2723 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 SDHAF1A6NFY7 115 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 DAZ1Q9NQZ3 744 aaKnown RBP8.31□□□□□ -1.08
SNED1-211ENST00000491761 TRGV1A0A0A0MS02 117 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 LOXL1Q08397 574 aaPredicted RBP8.31□□□□□ -1.08
SNED1-211ENST00000491761 LINC01545Q5VT33 79 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 SPATA12Q7Z6I5 190 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 Q8N6K4 173 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 CRYBA4P53673 196 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 GAGE2AQ6NT46 116 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 TIMM21Q9BVV7 248 aa8.31□□□□□ -1.08
SNED1-211ENST00000491761 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
SNED1-211ENST00000491761 DEFB131AP59861 70 aa8.3□□□□□ -1.08
SNED1-211ENST00000491761 CEND1Q8N111 149 aa8.3□□□□□ -1.08
SNED1-211ENST00000491761 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
SNED1-211ENST00000491761 F8VRH5 84 aa8.3□□□□□ -1.08
SNED1-211ENST00000491761 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
SNED1-211ENST00000491761 Q8N8P6 123 aa8.3□□□□□ -1.08
SNED1-211ENST00000491761 DPH3Q96FX2 82 aa8.3□□□□□ -1.08
SNED1-211ENST00000491761 GNRH2O43555 120 aa8.29□□□□□ -1.08
SNED1-211ENST00000491761 ZNF843Q8N446 348 aa8.29□□□□□ -1.08
SNED1-211ENST00000491761 PTH2Q96A98 100 aa8.29□□□□□ -1.08
SNED1-211ENST00000491761 BUB3O43684 328 aa8.29□□□□□ -1.08
SNED1-211ENST00000491761 SMIM2Q9BVW6 85 aa8.29□□□□□ -1.08
SNED1-211ENST00000491761 AGPAT4-IT1Q9H0P7 198 aa8.29□□□□□ -1.08
SNED1-211ENST00000491761 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.28□□□□□ -1.08
SNED1-211ENST00000491761 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
SNED1-211ENST00000491761 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
SNED1-211ENST00000491761 SCRT2Q9NQ03 307 aa8.28□□□□□ -1.08
SNED1-211ENST00000491761 F8W1H4 67 aa8.28□□□□□ -1.08
SNED1-211ENST00000491761 RPL35AP18077 110 aaKnown RBP8.28□□□□□ -1.08
SNED1-211ENST00000491761 CFHR3Q02985 330 aa8.28□□□□□ -1.08
SNED1-211ENST00000491761 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
SNED1-211ENST00000491761 CENPVL3A0A0U1RRI6 287 aa8.28□□□□□ -1.08
SNED1-211ENST00000491761 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
SNED1-211ENST00000491761 SMAD5-AS1Q9Y6J3 95 aa8.28□□□□□ -1.08
SNED1-211ENST00000491761 RBAKDNA6NC62 111 aa8.27□□□□□ -1.08
SNED1-211ENST00000491761 ZNF80P51504 273 aaPredicted RBP8.27□□□□□ -1.08
SNED1-211ENST00000491761 PPDPFLQ8WWR9 84 aa8.27□□□□□ -1.08
SNED1-211ENST00000491761 PFN2P35080 140 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
SNED1-211ENST00000491761 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
SNED1-211ENST00000491761 PLEKHB2Q96CS7 222 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 XCL2Q9UBD3 114 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 FAM223BA6NKX1 122 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 PRAC2D3DTV9 90 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 FAM223AQ8IWN6 122 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 IGHV1-69DA0A0B4J2H0 117 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 SLC25A20O43772 301 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 IGHV1-69P01742 117 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 DEFB113Q30KQ7 82 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.09
SNED1-211ENST00000491761 A0A087WX48 190 aa8.26□□□□□ -1.09
SNED1-211ENST00000491761 SRSF2Q01130 221 aaKnown RBP8.26□□□□□ -1.09
SNED1-211ENST00000491761 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
SNED1-211ENST00000491761 PRORYQ9H606 182 aa8.26□□□□□ -1.09
SNED1-211ENST00000491761 U3KQK5 164 aa8.26□□□□□ -1.09
SNED1-211ENST00000491761 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
SNED1-211ENST00000491761 MALP21145 153 aa8.26□□□□□ -1.09
SNED1-211ENST00000491761 PMVKQ15126 192 aa8.26□□□□□ -1.09
SNED1-211ENST00000491761 MORN3Q6PF18 240 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms