RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 GAGE12GP0CL81 117 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 GAGE12IP0CL82 117 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 NTF3P20783 257 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 CTRLP40313 264 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 RIGQ13278 110 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 DMRTA1Q5VZB9 504 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 MRPL54Q6P161 138 aaKnown RBP9.67□□□□□ -0.86
CDK9-204ENST00000491521 WDR73Q6P4I2 378 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 CBLN2Q8IUK8 224 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 BTF3L4Q96K17 158 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
CDK9-204ENST00000491521 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
CDK9-204ENST00000491521 Q6ZTI0 123 aa9.66□□□□□ -0.86
CDK9-204ENST00000491521 NDUFAF3Q9BU61 184 aa9.66□□□□□ -0.86
CDK9-204ENST00000491521 MSRB1Q9NZV6 116 aa9.66□□□□□ -0.86
CDK9-204ENST00000491521 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.86
CDK9-204ENST00000491521 LYRM9A8MSI8 78 aa9.65□□□□□ -0.86
CDK9-204ENST00000491521 CAMPP49913 170 aa9.65□□□□□ -0.86
CDK9-204ENST00000491521 LGALS9BQ3B8N2 356 aa9.65□□□□□ -0.86
CDK9-204ENST00000491521 SMIM15Q7Z3B0 74 aa9.65□□□□□ -0.86
CDK9-204ENST00000491521 DKK2Q9UBU2 259 aa9.65□□□□□ -0.86
CDK9-204ENST00000491521 HECTD4Q9Y4D8 3996 aa9.64□□□□□ -0.87
CDK9-204ENST00000491521 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
CDK9-204ENST00000491521 ELOBQ15370 118 aa9.64□□□□□ -0.87
CDK9-204ENST00000491521 RASL10AQ92737 203 aa9.64□□□□□ -0.87
CDK9-204ENST00000491521 PTH2Q96A98 100 aa9.64□□□□□ -0.87
CDK9-204ENST00000491521 TGIF2-C20orf24A0A0A6YYL0 155 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 A0A1B0GW15 77 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 S100A8P05109 93 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 RAB4BP61018 213 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 DAD1P61803 113 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 ATP5L2Q7Z4Y8 100 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 JPT2Q9H910 190 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 DNAH2Q9P225 4427 aa9.63□□□□□ -0.87
CDK9-204ENST00000491521 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 A8MWV9 139 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 NXPH4O95158 308 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 HBBP68871 147 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
CDK9-204ENST00000491521 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 AP1S3Q96PC3 154 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 CNFNQ9BYD5 112 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 KRTAP17-1Q9BYP8 105 aa9.62□□□□□ -0.87
CDK9-204ENST00000491521 A0A087WWL8 130 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 M0R2N4 97 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 RS1O15537 224 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 IGHV3-53P01767 116 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 P0DMU3 169 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 FAM231AP0DMU4 169 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 FAM231CP0DMU5 169 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 FAM74A4Q5TZK3 123 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 UBE2DNLQ8IWF7 75 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 FAM210BQ96KR6 192 aa9.61□□□□□ -0.87
CDK9-204ENST00000491521 IGHV3-73A0A0B4J1V6 119 aa9.6□□□□□ -0.87
CDK9-204ENST00000491521 A0A1B0GXF2 115 aa9.6□□□□□ -0.87
CDK9-204ENST00000491521 MGPP08493 103 aa9.6□□□□□ -0.87
CDK9-204ENST00000491521 EVI2AP22794 236 aa9.6□□□□□ -0.87
CDK9-204ENST00000491521 CFAP126Q5VTH2 177 aa9.6□□□□□ -0.87
CDK9-204ENST00000491521 POM121L12Q8N7R1 296 aa9.6□□□□□ -0.87
CDK9-204ENST00000491521 SAMD10Q9BYL1 202 aa9.6□□□□□ -0.87
CDK9-204ENST00000491521 DNAH17Q9UFH2 4485 aa9.59□□□□□ -0.87
CDK9-204ENST00000491521 TRBV24-1A0A075B6N3 115 aa9.59□□□□□ -0.87
CDK9-204ENST00000491521 TRAV4A0A0B4J268 109 aa9.59□□□□□ -0.87
CDK9-204ENST00000491521 F5H697 171 aa9.59□□□□□ -0.87
CDK9-204ENST00000491521 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
CDK9-204ENST00000491521 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 CRYGDP07320 174 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 COX19Q49B96 90 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 RASL11AQ6T310 242 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 YPEL4Q96NS1 127 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 TMEM191AQ9H0A3 160 aa9.58□□□□□ -0.88
CDK9-204ENST00000491521 RHODO00212 210 aa9.57□□□□□ -0.88
CDK9-204ENST00000491521 ATP5G1P05496 136 aa9.57□□□□□ -0.88
CDK9-204ENST00000491521 ZNF56Q15929 161 aa9.57□□□□□ -0.88
CDK9-204ENST00000491521 FAT2Q9NYQ8 4349 aa9.57□□□□□ -0.88
CDK9-204ENST00000491521 HERC2O95714 4834 aa9.57□□□□□ -0.88
CDK9-204ENST00000491521 COLCA2A8K830 154 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 CIDEAO60543 219 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 ZFP2Q6ZN57 461 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 TMEM136Q6ZRR5 245 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 AMN1Q8IY45 258 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.56□□□□□ -0.88
CDK9-204ENST00000491521 FRZBQ92765 325 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 C18orf15Q96N68 181 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 GNB1LQ9BYB4 327 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
CDK9-204ENST00000491521 F5H768 121 aa9.55□□□□□ -0.88
CDK9-204ENST00000491521 APCSP02743 223 aa9.55□□□□□ -0.88
CDK9-204ENST00000491521 RAB4AP20338 218 aa9.55□□□□□ -0.88
CDK9-204ENST00000491521 RPS10P46783 165 aaKnown RBP9.55□□□□□ -0.88
CDK9-204ENST00000491521 FAM104BQ5XKR9 115 aa9.55□□□□□ -0.88
CDK9-204ENST00000491521 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
CDK9-204ENST00000491521 MUC4Q99102 2169 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms