RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 RPL36ALQ969Q0 106 aaKnown RBP13.32□□□□□ -0.28
CLIP2-208ENST00000491075 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
CLIP2-208ENST00000491075 INMT-MINDY4F8WBC2 141 aa13.31□□□□□ -0.28
CLIP2-208ENST00000491075 ENHOQ6UWT2 76 aa13.31□□□□□ -0.28
CLIP2-208ENST00000491075 A0A087WWL8 130 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 TMEM262E9PQX1 116 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 CXorf1O96002 111 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 ARMS2P0C7Q2 107 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 UBE2D3P61077 147 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 UBE2D2P62837 147 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 SFRP2Q96HF1 295 aa13.3□□□□□ -0.28
CLIP2-208ENST00000491075 TRBV7-3A0A075B6L6 115 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 TRAV34A0A0B4J273 112 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 SSNA1O43805 119 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 HLA-DQA1P01909 254 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 Q6ZRU5 148 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 LINC00299Q6ZSB3 139 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 C15orf54Q8N8G6 183 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 C9orf163Q8N9P6 203 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 PSMG3Q9BT73 122 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-208ENST00000491075 PHLDA3Q9Y5J5 127 aa13.29□□□□□ -0.28
CLIP2-208ENST00000491075 TRBV6-8A0A0A6YYG3 113 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 A0A1W2PRE2 83 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 MBP02144 154 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 Q86TA4 180 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 HSD17B11Q8NBQ5 300 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 S100ZQ8WXG8 99 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 NDUFA13Q9P0J0 144 aa13.28□□□□□ -0.28
CLIP2-208ENST00000491075 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.28□□□□□ -0.28
CLIP2-208ENST00000491075 M0R036 132 aa13.27□□□□□ -0.29
CLIP2-208ENST00000491075 ANGP03950 147 aaKnown RBP13.27□□□□□ -0.29
CLIP2-208ENST00000491075 PRSS1P07477 247 aa13.27□□□□□ -0.29
CLIP2-208ENST00000491075 MPV17L2Q567V2 206 aa13.27□□□□□ -0.29
CLIP2-208ENST00000491075 ZC2HC1AQ96GY0 325 aa13.27□□□□□ -0.29
CLIP2-208ENST00000491075 A0A0D9SG52 128 aa13.26□□□□□ -0.29
CLIP2-208ENST00000491075 M0R381 172 aa13.26□□□□□ -0.29
CLIP2-208ENST00000491075 TPT1P13693 172 aaKnown RBP13.26□□□□□ -0.29
CLIP2-208ENST00000491075 PKIAP61925 76 aa13.26□□□□□ -0.29
CLIP2-208ENST00000491075 SERF2P84101 59 aa13.26□□□□□ -0.29
CLIP2-208ENST00000491075 MIAQ16674 131 aa13.26□□□□□ -0.29
CLIP2-208ENST00000491075 MARVELD1Q9BSK0 173 aa13.26□□□□□ -0.29
CLIP2-208ENST00000491075 GRIFINA4D1Z8 144 aa13.25□□□□□ -0.29
CLIP2-208ENST00000491075 UPK1BO75841 260 aa13.25□□□□□ -0.29
CLIP2-208ENST00000491075 IFNA7P01567 189 aa13.25□□□□□ -0.29
CLIP2-208ENST00000491075 RPL19P84098 196 aaKnown RBP13.25□□□□□ -0.29
CLIP2-208ENST00000491075 ZFP82Q8N141 532 aa13.25□□□□□ -0.29
CLIP2-208ENST00000491075 OR10G8Q8NGN5 311 aa13.25□□□□□ -0.29
CLIP2-208ENST00000491075 ACTR3CQ9C0K3 210 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-208ENST00000491075 PEX7O00628 323 aa13.24□□□□□ -0.29
CLIP2-208ENST00000491075 SH2D1AO60880 128 aa13.24□□□□□ -0.29
CLIP2-208ENST00000491075 ATP6V0CP27449 155 aa13.24□□□□□ -0.29
CLIP2-208ENST00000491075 CRIP1P50238 77 aa13.24□□□□□ -0.29
CLIP2-208ENST00000491075 LRP2P98164 4655 aa13.24□□□□□ -0.29
CLIP2-208ENST00000491075 PANO1I0J062 215 aa13.23□□□□□ -0.29
CLIP2-208ENST00000491075 FAM162BQ5T6X4 162 aa13.23□□□□□ -0.29
CLIP2-208ENST00000491075 PTTG1O95997 202 aa13.22□□□□□ -0.29
CLIP2-208ENST00000491075 SDIM1Q6ZPB5 146 aa13.22□□□□□ -0.29
CLIP2-208ENST00000491075 COX8CQ7Z4L0 72 aa13.22□□□□□ -0.29
CLIP2-208ENST00000491075 CHCHD5Q9BSY4 110 aa13.22□□□□□ -0.29
CLIP2-208ENST00000491075 TNFSF18Q9UNG2 199 aa13.22□□□□□ -0.29
CLIP2-208ENST00000491075 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.21□□□□□ -0.29
CLIP2-208ENST00000491075 HIST1H2BAQ96A08 127 aa13.21□□□□□ -0.29
CLIP2-208ENST00000491075 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.29
CLIP2-208ENST00000491075 TNXBP22105 4242 aa13.21□□□□□ -0.29
CLIP2-208ENST00000491075 RAB4BP61018 213 aa13.2□□□□□ -0.3
CLIP2-208ENST00000491075 CIRBPQ14011 172 aaKnown RBP13.2□□□□□ -0.3
CLIP2-208ENST00000491075 LINC01559Q495D7 138 aa13.2□□□□□ -0.3
CLIP2-208ENST00000491075 NEXN-AS1Q8NBZ9 246 aa13.2□□□□□ -0.3
CLIP2-208ENST00000491075 NKX6-2Q9C056 277 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-208ENST00000491075 PRR34Q9NV39 138 aa13.2□□□□□ -0.3
CLIP2-208ENST00000491075 RNF213Q63HN8 5207 aa13.19□□□□□ -0.3
CLIP2-208ENST00000491075 TMSB15BA0A087X1C1 80 aa13.19□□□□□ -0.3
CLIP2-208ENST00000491075 UBE2G2P60604 165 aa13.19□□□□□ -0.3
CLIP2-208ENST00000491075 IFITM3Q01628 133 aa13.19□□□□□ -0.3
CLIP2-208ENST00000491075 CLRN3Q8NCR9 226 aa13.19□□□□□ -0.3
CLIP2-208ENST00000491075 ZNF56Q15929 161 aa13.18□□□□□ -0.3
CLIP2-208ENST00000491075 ZNF674Q2M3X9 581 aa13.18□□□□□ -0.3
CLIP2-208ENST00000491075 PRR27Q6MZM9 219 aa13.18□□□□□ -0.3
CLIP2-208ENST00000491075 KRTAP26-1Q6PEX3 210 aa13.18□□□□□ -0.3
CLIP2-208ENST00000491075 CNBPP62633 177 aaKnown RBP13.17□□□□□ -0.3
CLIP2-208ENST00000491075 TMEM97Q5BJF2 176 aa13.17□□□□□ -0.3
CLIP2-208ENST00000491075 CLPSL2Q6UWE3 100 aa13.17□□□□□ -0.3
CLIP2-208ENST00000491075 FMC1Q96HJ9 113 aa13.17□□□□□ -0.3
CLIP2-208ENST00000491075 AQP10Q96PS8 301 aa13.17□□□□□ -0.3
CLIP2-208ENST00000491075 FAM74A7A6NL05 159 aa13.16□□□□□ -0.3
CLIP2-208ENST00000491075 UBE2G1P62253 170 aa13.16□□□□□ -0.3
CLIP2-208ENST00000491075 RNF185Q96GF1 192 aa13.16□□□□□ -0.3
CLIP2-208ENST00000491075 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.3
CLIP2-208ENST00000491075 ZNF726P1Q15940 193 aa13.15□□□□□ -0.3
CLIP2-208ENST00000491075 LINC00269Q8N2A0 174 aa13.15□□□□□ -0.3
CLIP2-208ENST00000491075 RBX1P62877 108 aa13.14□□□□□ -0.31
CLIP2-208ENST00000491075 TRBV6-1A0A0K0K1D8 114 aa13.13□□□□□ -0.31
CLIP2-208ENST00000491075 NTM-AS1Q6ZSK4 140 aa13.13□□□□□ -0.31
CLIP2-208ENST00000491075 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
CLIP2-208ENST00000491075 TRBV25-1A0A075B6N4 114 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 IGHV3-64A0A075B6Q5 118 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 hDV102S1A0JD36 115 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 LTAP01374 205 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms