RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 A0A087WWL8 130 aa10.88□□□□□ -0.67
SRGAP3-209ENST00000490889 CTXND1A0A1B0GTU2 59 aa10.88□□□□□ -0.67
SRGAP3-209ENST00000490889 FAM74A7A6NL05 159 aa10.88□□□□□ -0.67
SRGAP3-209ENST00000490889 RHODO00212 210 aa10.88□□□□□ -0.67
SRGAP3-209ENST00000490889 SH2D1AO60880 128 aa10.88□□□□□ -0.67
SRGAP3-209ENST00000490889 KRTAP10-4P60372 401 aaPredicted RBP10.88□□□□□ -0.67
SRGAP3-209ENST00000490889 MED28Q9H204 178 aa10.88□□□□□ -0.67
SRGAP3-209ENST00000490889 IGKV2D-24A0A075B6R9 120 aa10.87□□□□□ -0.67
SRGAP3-209ENST00000490889 COX8CQ7Z4L0 72 aa10.87□□□□□ -0.67
SRGAP3-209ENST00000490889 SYT8Q8NBV8 401 aa10.87□□□□□ -0.67
SRGAP3-209ENST00000490889 OR11H4Q8NGC9 324 aa10.87□□□□□ -0.67
SRGAP3-209ENST00000490889 SFRP2Q96HF1 295 aa10.87□□□□□ -0.67
SRGAP3-209ENST00000490889 COX11Q9Y6N1 276 aa10.87□□□□□ -0.67
SRGAP3-209ENST00000490889 TMSB15BA0A087X1C1 80 aa10.86□□□□□ -0.67
SRGAP3-209ENST00000490889 RBFOX3A6NFN3 312 aa10.86□□□□□ -0.67
SRGAP3-209ENST00000490889 HIST1H2BAQ96A08 127 aa10.86□□□□□ -0.67
SRGAP3-209ENST00000490889 UBE2WQ96B02 151 aa10.86□□□□□ -0.67
SRGAP3-209ENST00000490889 URGCP-MRPS24S4R325 110 aa10.86□□□□□ -0.67
SRGAP3-209ENST00000490889 M0R381 172 aa10.85□□□□□ -0.67
SRGAP3-209ENST00000490889 Q8N976 141 aa10.85□□□□□ -0.67
SRGAP3-209ENST00000490889 DEFB104AQ8WTQ1 72 aa10.85□□□□□ -0.67
SRGAP3-209ENST00000490889 RMI2Q96E14 147 aa10.85□□□□□ -0.67
SRGAP3-209ENST00000490889 GIPP09681 153 aaPredicted RBP10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 ZNF674Q2M3X9 581 aa10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 INO80EQ8NBZ0 244 aaPredicted RBP10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 CIRBP-AS1Q8TBR5 109 aa10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 CHAC1Q9BUX1 264 aa10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 ZFP30Q9Y2G7 519 aa10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
SRGAP3-209ENST00000490889 FXYD6-FXYD2A0A087WZ82 144 aa10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 BORCS7-ASMTA0A0B4J1R7 106 aa10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 PTTG1O95997 202 aa10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 TPT1P13693 172 aaKnown RBP10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 UBE2D3P61077 147 aa10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 UBE2D2P62837 147 aa10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 FAM162BQ5T6X4 162 aa10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 ATRAIDQ6UW56 229 aa10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 NKX6-2Q9C056 277 aaPredicted RBP10.83□□□□□ -0.68
SRGAP3-209ENST00000490889 A0A087WX48 190 aa10.82□□□□□ -0.68
SRGAP3-209ENST00000490889 G3V3Q6 166 aa10.82□□□□□ -0.68
SRGAP3-209ENST00000490889 FMC1Q96HJ9 113 aa10.82□□□□□ -0.68
SRGAP3-209ENST00000490889 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
SRGAP3-209ENST00000490889 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 TRBV6-1A0A0K0K1D8 114 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 MAP1LC3B2A6NCE7 125 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 LTAP01374 205 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 UBE2G1P62253 170 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 RPL36AP83881 106 aaKnown RBP10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 AKR1C8PQ5T2L2 129 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 ZFP82Q8N141 532 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 RPL36ALQ969Q0 106 aaKnown RBP10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 MAP1LC3BQ9GZQ8 125 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 PKHD1L1Q86WI1 4243 aa10.81□□□□□ -0.68
SRGAP3-209ENST00000490889 TRBV7-3A0A075B6L6 115 aa10.8□□□□□ -0.68
SRGAP3-209ENST00000490889 ENHOQ6UWT2 76 aa10.8□□□□□ -0.68
SRGAP3-209ENST00000490889 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
SRGAP3-209ENST00000490889 CYTL1Q9NRR1 136 aa10.8□□□□□ -0.68
SRGAP3-209ENST00000490889 RPL19P84098 196 aaKnown RBP10.79□□□□□ -0.68
SRGAP3-209ENST00000490889 ELOBQ15370 118 aa10.79□□□□□ -0.68
SRGAP3-209ENST00000490889 MPV17L2Q567V2 206 aa10.79□□□□□ -0.68
SRGAP3-209ENST00000490889 TRBV6-8A0A0A6YYG3 113 aa10.78□□□□□ -0.68
SRGAP3-209ENST00000490889 FHITP49789 147 aa10.78□□□□□ -0.68
SRGAP3-209ENST00000490889 CST9LP1Q5W188 147 aa10.78□□□□□ -0.68
SRGAP3-209ENST00000490889 NEXN-AS1Q8NBZ9 246 aa10.78□□□□□ -0.68
SRGAP3-209ENST00000490889 OR10AG1Q8NH19 301 aa10.78□□□□□ -0.68
SRGAP3-209ENST00000490889 TMEM262E9PQX1 116 aa10.77□□□□□ -0.69
SRGAP3-209ENST00000490889 AKR1C3P42330 323 aa10.77□□□□□ -0.69
SRGAP3-209ENST00000490889 Q0VG73 95 aa10.77□□□□□ -0.69
SRGAP3-209ENST00000490889 PRR27Q6MZM9 219 aa10.77□□□□□ -0.69
SRGAP3-209ENST00000490889 KCNIP4Q6PIL6 250 aa10.77□□□□□ -0.69
SRGAP3-209ENST00000490889 C15orf54Q8N8G6 183 aa10.77□□□□□ -0.69
SRGAP3-209ENST00000490889 C1orf43Q9BWL3 253 aa10.77□□□□□ -0.69
SRGAP3-209ENST00000490889 UBR4Q5T4S7 5183 aa10.76□□□□□ -0.69
SRGAP3-209ENST00000490889 ZNF56Q15929 161 aa10.76□□□□□ -0.69
SRGAP3-209ENST00000490889 TCEAL7Q9BRU2 100 aa10.76□□□□□ -0.69
SRGAP3-209ENST00000490889 ARPC5O15511 151 aa10.75□□□□□ -0.69
SRGAP3-209ENST00000490889 PAGE4O60829 102 aa10.75□□□□□ -0.69
SRGAP3-209ENST00000490889 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
SRGAP3-209ENST00000490889 RAB4BP61018 213 aa10.75□□□□□ -0.69
SRGAP3-209ENST00000490889 MUC21A0A0G2JKD1 596 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 MUC21A0A140T8X8 626 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 USP17L23D6RBM5 183 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 CRPP02741 224 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 ANGP03950 147 aaKnown RBP10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 C14orf177Q52M58 125 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 NTM-AS1Q6ZSK4 140 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 STOML3Q8TAV4 291 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
SRGAP3-209ENST00000490889 SCO2A0A1W2PP80 73 aa10.73□□□□□ -0.69
SRGAP3-209ENST00000490889 SNAI2O43623 268 aa10.73□□□□□ -0.69
SRGAP3-209ENST00000490889 HLA-DQA1P01909 254 aa10.73□□□□□ -0.69
SRGAP3-209ENST00000490889 CXCL1P09341 107 aa10.73□□□□□ -0.69
SRGAP3-209ENST00000490889 HNRNPA3P51991 378 aaKnown RBP10.73□□□□□ -0.69
SRGAP3-209ENST00000490889 SSBP4Q9BWG4 385 aaPredicted RBP10.73□□□□□ -0.69
SRGAP3-209ENST00000490889 A0A1B0GV50 99 aa10.72□□□□□ -0.69
SRGAP3-209ENST00000490889 OXTP01178 125 aa10.72□□□□□ -0.69
SRGAP3-209ENST00000490889 PRSS1P07477 247 aa10.72□□□□□ -0.69
SRGAP3-209ENST00000490889 KRTAP26-1Q6PEX3 210 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms