RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	CRYGD	P07320	174 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	IGLC6	P0CF74	106 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	GAGE1	Q13065	139 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	GAGE4	Q13068	117 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	GAGE5	Q13069	117 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	GAGE13	Q4V321	117 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	PIK3CD-AS1	Q5SR53	167 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	SPANXN1	Q5VSR9	72 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	PRADC1	Q9BSG0	188 aa		12.74	□□□□□ -0.37
C4A-256	ENST00000490663	SSBP4	Q9BWG4	385 aa	Predicted RBP	12.74	□□□□□ -0.37
C4A-256	ENST00000490663	TRBV6-4	A0A1B0GX49	114 aa		12.73	□□□□□ -0.37
C4A-256	ENST00000490663	OR5AL1	P0C617	328 aa		12.73	□□□□□ -0.37
C4A-256	ENST00000490663	ZFP2	Q6ZN57	461 aa		12.73	□□□□□ -0.37
C4A-256	ENST00000490663	WFDC10B	Q8IUB3	73 aa		12.73	□□□□□ -0.37
C4A-256	ENST00000490663	FER1L6-AS1	Q8NA97	138 aa		12.73	□□□□□ -0.37
C4A-256	ENST00000490663	UPK3B	Q9BT76	320 aa		12.73	□□□□□ -0.37
C4A-256	ENST00000490663	MSRB1	Q9NZV6	116 aa		12.72	□□□□□ -0.37
C4A-256	ENST00000490663	ZNF727	A8MUV8	499 aa		12.71	□□□□□ -0.37
C4A-256	ENST00000490663	RHOD	O00212	210 aa		12.71	□□□□□ -0.37
C4A-256	ENST00000490663	CIDEA	O60543	219 aa		12.71	□□□□□ -0.37
C4A-256	ENST00000490663	RPS20	P60866	119 aa	Known RBP	12.71	□□□□□ -0.37
C4A-256	ENST00000490663	ZNF56	Q15929	161 aa		12.71	□□□□□ -0.37
C4A-256	ENST00000490663	RPP21	Q9H633	154 aa	Known RBP	12.71	□□□□□ -0.37
C4A-256	ENST00000490663	BIN3	Q9NQY0	253 aa		12.71	□□□□□ -0.37
C4A-256	ENST00000490663	LYZL1	Q6UWQ5	148 aa		12.7	□□□□□ -0.38
C4A-256	ENST00000490663	SIVA1	O15304	175 aa		12.69	□□□□□ -0.38
C4A-256	ENST00000490663	GATC	O43716	136 aa	Known RBP	12.68	□□□□□ -0.38
C4A-256	ENST00000490663	LINC00694	P0DN24	101 aa		12.68	□□□□□ -0.38
C4A-256	ENST00000490663	C1orf134	Q5TEV5	83 aa		12.68	□□□□□ -0.38
C4A-256	ENST00000490663	LINC01551	Q86U37	167 aa		12.68	□□□□□ -0.38
C4A-256	ENST00000490663	FAT2	Q9NYQ8	4349 aa		12.67	□□□□□ -0.38
C4A-256	ENST00000490663	XKRY2	A2RUG3	117 aa		12.67	□□□□□ -0.38
C4A-256	ENST00000490663	MGP	P08493	103 aa		12.67	□□□□□ -0.38
C4A-256	ENST00000490663	ATP6V0E2	Q8NHE4	81 aa		12.67	□□□□□ -0.38
C4A-256	ENST00000490663	AP1S3	Q96PC3	154 aa		12.67	□□□□□ -0.38
C4A-256	ENST00000490663	ERVFC1-1	P60608	527 aa		12.66	□□□□□ -0.38
C4A-256	ENST00000490663	GTSF1	Q8WW33	167 aa		12.66	□□□□□ -0.38
C4A-256	ENST00000490663	KIF25-AS1	Q9Y6Z4	181 aa		12.66	□□□□□ -0.38
C4A-256	ENST00000490663	PRSS29P	A6NIE9	313 aa		12.65	□□□□□ -0.38
C4A-256	ENST00000490663		F5H697	171 aa		12.65	□□□□□ -0.38
C4A-256	ENST00000490663	NDUFS6	O75380	124 aa	Known RBP	12.65	□□□□□ -0.38
C4A-256	ENST00000490663	CTRL	P40313	264 aa		12.65	□□□□□ -0.38
C4A-256	ENST00000490663	IFITM2	Q01629	132 aa		12.65	□□□□□ -0.38
C4A-256	ENST00000490663	PEA15	Q15121	130 aa		12.65	□□□□□ -0.38
C4A-256	ENST00000490663	C6orf223	Q8N319	242 aa		12.65	□□□□□ -0.38
C4A-256	ENST00000490663	TNFRSF18	Q9Y5U5	241 aa		12.65	□□□□□ -0.38
C4A-256	ENST00000490663	CACNG7	P62955	275 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663	ADIRF	Q15847	76 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663	TTC32	Q5I0X7	151 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663	OR10J3	Q5JRS4	329 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663	FAM231D	Q6ZW35	169 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663	SH2D6	Q7Z4S9	175 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663		Q8N3U1	123 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663	LY96	Q9Y6Y9	160 aa		12.64	□□□□□ -0.39
C4A-256	ENST00000490663	HECTD4	Q9Y4D8	3996 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	SMIM17	P0DL12	118 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	NTF3	P20783	257 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	EVI2A	P22794	236 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	LINC00315	P59091	139 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	RAB4B	P61018	213 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	RPL23	P62829	140 aa	Known RBP	12.63	□□□□□ -0.39
C4A-256	ENST00000490663	PGLYRP4	Q96LB8	373 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	GTSF1L	Q9H1H1	148 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663	PKD1	P98161	4303 aa		12.63	□□□□□ -0.39
C4A-256	ENST00000490663		A0A1W2PPQ1	181 aa		12.62	□□□□□ -0.39
C4A-256	ENST00000490663	TMEM241	Q24JQ0	296 aa		12.62	□□□□□ -0.39
C4A-256	ENST00000490663	NEXN-AS1	Q8NBZ9	246 aa		12.62	□□□□□ -0.39
C4A-256	ENST00000490663	IGHV3-38	A0A0C4DH36	116 aa		12.61	□□□□□ -0.39
C4A-256	ENST00000490663		F2Z2F3	143 aa		12.61	□□□□□ -0.39
C4A-256	ENST00000490663	RAB14	P61106	215 aa		12.61	□□□□□ -0.39
C4A-256	ENST00000490663	TNP2	Q05952	138 aa		12.61	□□□□□ -0.39
C4A-256	ENST00000490663	TWIST1	Q15672	202 aa		12.61	□□□□□ -0.39
C4A-256	ENST00000490663	ISOC2	Q96AB3	205 aa		12.61	□□□□□ -0.39
C4A-256	ENST00000490663	IGHV3-30	P01768	117 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	IGHV3-33	P01772	117 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	IGHV3-30-3	P0DP02	117 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	IGHV3-30-5	P0DP03	117 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	TIRAP	P58753	221 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	RPL36A	P83881	106 aa	Known RBP	12.6	□□□□□ -0.39
C4A-256	ENST00000490663	SOHLH1	Q5JUK2	328 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	LELP1	Q5T871	98 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	SUMO4	Q6EEV6	95 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	LINC00336	Q6ZUF6	198 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663	RPL36AL	Q969Q0	106 aa	Known RBP	12.6	□□□□□ -0.39
C4A-256	ENST00000490663	NAT8	Q9UHE5	227 aa		12.6	□□□□□ -0.39
C4A-256	ENST00000490663		A0A1B0GVY2	172 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663		A8MWL6	223 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663	TRGC1	P0CF51	173 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663	DNAH10OS	P0CZ25	163 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663	FOXA3	P55318	350 aa	Predicted RBP	12.59	□□□□□ -0.39
C4A-256	ENST00000490663	UBE2D3	P61077	147 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663	UBE2D2	P62837	147 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663	FAM74A3	Q4VXF1	159 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663	OSTC	Q9NRP0	149 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663		V9GYV3	84 aa		12.59	□□□□□ -0.39
C4A-256	ENST00000490663	BIRC6	Q9NR09	4857 aa		12.58	□□□□□ -0.4
C4A-256	ENST00000490663	TRBV7-3	A0A075B6L6	115 aa		12.58	□□□□□ -0.4
C4A-256	ENST00000490663	TRAV8-6	A0A0B4J262	113 aa		12.58	□□□□□ -0.4
C4A-256	ENST00000490663	TRBV10-1	A0A0K0K1A3	114 aa		12.58	□□□□□ -0.4
C4A-256	ENST00000490663	DPH3P1	Q9H4G8	78 aa		12.58	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms