RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 IGKV2D-40P01614 121 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 MAGEA5P43359 124 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 RPL27AP46776 148 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 MRGPRG-AS1Q2M3A8 158 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 DCANP1Q8TF63 244 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 AGPAT4-IT1Q9H0P7 198 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 KLK15Q9H2R5 256 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 BEX4Q9NWD9 120 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 PYGO1Q9Y3Y4 419 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 ICOSQ9Y6W8 199 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 ATRXP46100 2492 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 SVILO95425 2214 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 DSCAML1Q8TD84 2053 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 TRAV26-2A0A0B4J265 109 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 IGHV1-69DA0A0B4J2H0 117 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 A0A0J9YX75 114 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 I3L2K1 104 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 J3QLI3 93 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 LEPROTO15243 131 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 PPP1R17O96001 155 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 TRGV3P03979 118 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 EDN2P20800 178 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 DLX1P56177 255 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 SUMO2P61956 95 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 SLC25A45Q8N413 288 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 SERP2Q8N6R1 65 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNF491Q8N8L2 437 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 FAM19A4Q96LR4 140 aa3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 ANKRD11Q6UB99 2663 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-206ENST00000489853 PI4KAP42356 2102 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 TRAV41A0A0B4J266 112 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 IGHV5-10-1A0A0J9YXX1 117 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 TINCRA0A1B0GVN0 87 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 SDHAF1A6NFY7 115 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 NDUFC2-KCTD14E9PQ53 114 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 OXTP01178 125 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 CD59P13987 128 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 TSPEAR-AS2P59090 65 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 ARFGEF3Q5TH69 2177 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 LINC00311Q8N616 119 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 DEFB119Q8N690 84 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 C14orf178Q8N769 122 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 C8orf31Q8N9H6 132 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 CEP295Q9C0D2 2601 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 DYNLRB1Q9NP97 96 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 NBEAQ8NFP9 2946 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 NAV3Q8IVL0 2385 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 TRBV7-1A0A0A6YYK4 115 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 IGHV1OR15-9A0A0B4J2B8 117 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 IGKV3D-20A0A0C4DH25 116 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 IGIPA6NJ69 53 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 M0R381 172 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 PRB4P10163 310 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 UBE2E1P51965 193 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 SEC61GP60059 68 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 IL11RAQ14626 422 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 ZGRF1Q86YA3 2104 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 DAND5Q8N907 189 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 SMCR5Q8TEV8 140 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 LINC00477Q96M19 166 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 UPK3BQ9BT76 320 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNRD1Q9P1U0 126 aa3.6□□□□□ -1.83
SNRNP40-206ENST00000489853 AKAP13Q12802 2813 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 FASNP49327 2511 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 TEX22C9J3V5 150 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 TSHBP01222 138 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 IGKV3-15P01624 115 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 IGHV1-2P23083 117 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 PSMB8P28062 276 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNF876PQ49A33 203 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 SPANXN1Q5VSR9 72 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 Q8TAT8 98 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 GAFA1Q96PS6 74 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 DSCR8Q96T75 97 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 TIMM17AQ99595 171 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 PRORYQ9H606 182 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 RNF7Q9UBF6 113 aa3.59□□□□□ -1.83
SNRNP40-206ENST00000489853 ITPR1Q14643 2758 aa3.59□□□□□ -1.84
SNRNP40-206ENST00000489853 CELSR3Q9NYQ7 3312 aa3.59□□□□□ -1.84
SNRNP40-206ENST00000489853 ABCA1O95477 2261 aa3.59□□□□□ -1.84
SNRNP40-206ENST00000489853 PLXNB1O43157 2135 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 IGHV7-4-1A0A0J9YVY3 117 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 I3L3M4 83 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 NTN3O00634 580 aaPredicted RBP3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 NDUFC2O95298 119 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 FOLR3P41439 243 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 Q0VFX4 171 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 RHOHQ15669 191 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 CLEC2BQ92478 149 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 TIMM21Q9BVV7 248 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 LOC400499M0QZD8 3231 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 DSPP15924 2871 aaKnown RBP3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 TRAV8-3A0A0A6YYJ7 113 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 EPM2AB3EWF7 344 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 K7EIM0 57 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 323.5 ms