RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 DAZAP1Q96EP5 407 aaKnown RBP13.02□□□□□ -0.33
EPHB4-207ENST00000489808 Q9UF83 564 aa13.02□□□□□ -0.33
EPHB4-207ENST00000489808 LY96Q9Y6Y9 160 aa13.02□□□□□ -0.33
EPHB4-207ENST00000489808 TRBV20OR9-2A0A075B6H5 130 aa13.01□□□□□ -0.33
EPHB4-207ENST00000489808 TRAV9-2A0A087WT02 112 aa13.01□□□□□ -0.33
EPHB4-207ENST00000489808 C19orf71A6NCJ1 209 aa13.01□□□□□ -0.33
EPHB4-207ENST00000489808 OR5AL1P0C617 328 aa13.01□□□□□ -0.33
EPHB4-207ENST00000489808 FAM74A4Q5TZK3 123 aa13.01□□□□□ -0.33
EPHB4-207ENST00000489808 C14orf178Q8N769 122 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-207ENST00000489808 OR10AG1Q8NH19 301 aa13.01□□□□□ -0.33
EPHB4-207ENST00000489808 GAGE12JA6NER3 117 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 RBFOX3A6NFN3 312 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 LINC00315P59091 139 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 GAGE1Q13065 139 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 GAGE4Q13068 117 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 GAGE5Q13069 117 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 GAGE13Q4V321 117 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 GTSF1LQ9H1H1 148 aa13□□□□□ -0.33
EPHB4-207ENST00000489808 K7EP13 123 aa12.99□□□□□ -0.33
EPHB4-207ENST00000489808 EVI2AP22794 236 aa12.99□□□□□ -0.33
EPHB4-207ENST00000489808 BIN3Q9NQY0 253 aa12.99□□□□□ -0.33
EPHB4-207ENST00000489808 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
EPHB4-207ENST00000489808 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
EPHB4-207ENST00000489808 LINC00694P0DN24 101 aa12.98□□□□□ -0.33
EPHB4-207ENST00000489808 RPS20P60866 119 aaKnown RBP12.98□□□□□ -0.33
EPHB4-207ENST00000489808 LELP1Q5T871 98 aa12.98□□□□□ -0.33
EPHB4-207ENST00000489808 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
EPHB4-207ENST00000489808 OR2D3Q8NGH3 330 aa12.98□□□□□ -0.33
EPHB4-207ENST00000489808 TNFRSF18Q9Y5U5 241 aa12.98□□□□□ -0.33
EPHB4-207ENST00000489808 TRAV8-6A0A0B4J262 113 aa12.97□□□□□ -0.33
EPHB4-207ENST00000489808 IGHV3-38A0A0C4DH36 116 aa12.97□□□□□ -0.33
EPHB4-207ENST00000489808 GZMBP10144 247 aa12.97□□□□□ -0.33
EPHB4-207ENST00000489808 TMEM250H0YL14 139 aa12.96□□□□□ -0.33
EPHB4-207ENST00000489808 P01737 135 aa12.96□□□□□ -0.33
EPHB4-207ENST00000489808 SSTP61278 116 aa12.96□□□□□ -0.33
EPHB4-207ENST00000489808 OR10J3Q5JRS4 329 aa12.96□□□□□ -0.33
EPHB4-207ENST00000489808 Q6ZRN7 208 aaPredicted RBP12.96□□□□□ -0.33
EPHB4-207ENST00000489808 OCC1Q8TAD7 63 aa12.96□□□□□ -0.33
EPHB4-207ENST00000489808 IGLC6P0CF74 106 aa12.95□□□□□ -0.34
EPHB4-207ENST00000489808 RAB4BP61018 213 aa12.95□□□□□ -0.34
EPHB4-207ENST00000489808 FER1L6-AS1Q8NA97 138 aa12.95□□□□□ -0.34
EPHB4-207ENST00000489808 NUDT10Q8NFP7 164 aa12.95□□□□□ -0.34
EPHB4-207ENST00000489808 NUDT11Q96G61 164 aa12.95□□□□□ -0.34
EPHB4-207ENST00000489808 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
EPHB4-207ENST00000489808 XKRY2A2RUG3 117 aa12.94□□□□□ -0.34
EPHB4-207ENST00000489808 LINC01556Q5JQF7 62 aa12.94□□□□□ -0.34
EPHB4-207ENST00000489808 NFE4Q86UQ8 179 aa12.94□□□□□ -0.34
EPHB4-207ENST00000489808 C10orf126Q8N4M7 172 aa12.94□□□□□ -0.34
EPHB4-207ENST00000489808 K7EN84 100 aa12.93□□□□□ -0.34
EPHB4-207ENST00000489808 TPPP3Q9BW30 176 aa12.93□□□□□ -0.34
EPHB4-207ENST00000489808 EIF5A2Q9GZV4 153 aaKnown RBP12.93□□□□□ -0.34
EPHB4-207ENST00000489808 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
EPHB4-207ENST00000489808 HERC2O95714 4834 aa12.93□□□□□ -0.34
EPHB4-207ENST00000489808 KIAA1109Q2LD37 5005 aa12.92□□□□□ -0.34
EPHB4-207ENST00000489808 F2Z2F3 143 aa12.92□□□□□ -0.34
EPHB4-207ENST00000489808 TOR2AQ5JU69 321 aa12.92□□□□□ -0.34
EPHB4-207ENST00000489808 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
EPHB4-207ENST00000489808 KIF25-AS1Q9Y6Z4 181 aa12.92□□□□□ -0.34
EPHB4-207ENST00000489808 LRP1BQ9NZR2 4599 aa12.91□□□□□ -0.34
EPHB4-207ENST00000489808 A0A087WWC5 75 aa12.91□□□□□ -0.34
EPHB4-207ENST00000489808 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
EPHB4-207ENST00000489808 CACNG7P62955 275 aa12.91□□□□□ -0.34
EPHB4-207ENST00000489808 RPL36AP83881 106 aaKnown RBP12.91□□□□□ -0.34
EPHB4-207ENST00000489808 RPL36ALQ969Q0 106 aaKnown RBP12.91□□□□□ -0.34
EPHB4-207ENST00000489808 RNASE7Q9H1E1 156 aaKnown RBP12.91□□□□□ -0.34
EPHB4-207ENST00000489808 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.34
EPHB4-207ENST00000489808 SMIM17P0DL12 118 aa12.9□□□□□ -0.34
EPHB4-207ENST00000489808 ZNF56Q15929 161 aa12.9□□□□□ -0.34
EPHB4-207ENST00000489808 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
EPHB4-207ENST00000489808 OR10G8Q8NGN5 311 aa12.9□□□□□ -0.34
EPHB4-207ENST00000489808 IBA57-AS1B1ANH7 110 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 F5H697 171 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 IGHV3-30P01768 117 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 IGHV3-33P01772 117 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 IGHV3-30-3P0DP02 117 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 IGHV3-30-5P0DP03 117 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 CEBPGP53567 150 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 UBE2D3P61077 147 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 UBE2D2P62837 147 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
EPHB4-207ENST00000489808 WDR73Q6P4I2 378 aa12.88□□□□□ -0.35
EPHB4-207ENST00000489808 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
EPHB4-207ENST00000489808 SPATA12Q7Z6I5 190 aa12.88□□□□□ -0.35
EPHB4-207ENST00000489808 NEXN-AS1Q8NBZ9 246 aa12.88□□□□□ -0.35
EPHB4-207ENST00000489808 RPP21Q9H633 154 aaKnown RBP12.88□□□□□ -0.35
EPHB4-207ENST00000489808 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
EPHB4-207ENST00000489808 DNAH5Q8TE73 4624 aa12.87□□□□□ -0.35
EPHB4-207ENST00000489808 C16orf90A8MZG2 172 aa12.86□□□□□ -0.35
EPHB4-207ENST00000489808 NTF3P20783 257 aa12.86□□□□□ -0.35
EPHB4-207ENST00000489808 KRTAP10-2P60368 255 aa12.85□□□□□ -0.35
EPHB4-207ENST00000489808 FAM231DQ6ZW35 169 aa12.85□□□□□ -0.35
EPHB4-207ENST00000489808 Q8N3U1 123 aa12.85□□□□□ -0.35
EPHB4-207ENST00000489808 SMIM7Q9BQ49 75 aa12.85□□□□□ -0.35
EPHB4-207ENST00000489808 GATCO43716 136 aaKnown RBP12.84□□□□□ -0.35
EPHB4-207ENST00000489808 CTRLP40313 264 aa12.84□□□□□ -0.35
EPHB4-207ENST00000489808 ERVFC1-1P60608 527 aa12.84□□□□□ -0.35
EPHB4-207ENST00000489808 CNFNQ9BYD5 112 aa12.84□□□□□ -0.35
EPHB4-207ENST00000489808 ZNF727A8MUV8 499 aa12.83□□□□□ -0.36
EPHB4-207ENST00000489808 M0QY20 66 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms