RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 GAGE13Q4V321 117 aa8.4□□□□□ -1.06
SMARCD3-213ENST00000489503 PIK3CD-AS1Q5SR53 167 aa8.4□□□□□ -1.06
SMARCD3-213ENST00000489503 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
SMARCD3-213ENST00000489503 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
SMARCD3-213ENST00000489503 OCC1Q8TAD7 63 aa8.4□□□□□ -1.06
SMARCD3-213ENST00000489503 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
SMARCD3-213ENST00000489503 PRADC1Q9BSG0 188 aa8.4□□□□□ -1.06
SMARCD3-213ENST00000489503 RHODO00212 210 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 SRP19P09132 144 aaKnown RBP8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 IGLC6P0CF74 106 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 SPANXN1Q5VSR9 72 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 FER1L6-AS1Q8NA97 138 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 NUDT10Q8NFP7 164 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 NUDT11Q96G61 164 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 SSBP4Q9BWG4 385 aaPredicted RBP8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 HECTD4Q9Y4D8 3996 aa8.39□□□□□ -1.07
SMARCD3-213ENST00000489503 C9JQL5 133 aa8.38□□□□□ -1.07
SMARCD3-213ENST00000489503 SIVA1O15304 175 aa8.38□□□□□ -1.07
SMARCD3-213ENST00000489503 CIDEAO60543 219 aa8.38□□□□□ -1.07
SMARCD3-213ENST00000489503 LINC00694P0DN24 101 aa8.38□□□□□ -1.07
SMARCD3-213ENST00000489503 SRSF3P84103 164 aaKnown RBP8.38□□□□□ -1.07
SMARCD3-213ENST00000489503 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
SMARCD3-213ENST00000489503 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
SMARCD3-213ENST00000489503 RPS20P60866 119 aaKnown RBP8.37□□□□□ -1.07
SMARCD3-213ENST00000489503 ZNF56Q15929 161 aa8.37□□□□□ -1.07
SMARCD3-213ENST00000489503 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
SMARCD3-213ENST00000489503 RPP21Q9H633 154 aaKnown RBP8.37□□□□□ -1.07
SMARCD3-213ENST00000489503 BIN3Q9NQY0 253 aa8.37□□□□□ -1.07
SMARCD3-213ENST00000489503 MSRB1Q9NZV6 116 aa8.37□□□□□ -1.07
SMARCD3-213ENST00000489503 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
SMARCD3-213ENST00000489503 TTC32Q5I0X7 151 aa8.36□□□□□ -1.07
SMARCD3-213ENST00000489503 LYZL1Q6UWQ5 148 aa8.36□□□□□ -1.07
SMARCD3-213ENST00000489503 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
SMARCD3-213ENST00000489503 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
SMARCD3-213ENST00000489503 MGPP08493 103 aa8.35□□□□□ -1.07
SMARCD3-213ENST00000489503 LINC00315P59091 139 aa8.35□□□□□ -1.07
SMARCD3-213ENST00000489503 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
SMARCD3-213ENST00000489503 AP1S3Q96PC3 154 aa8.35□□□□□ -1.07
SMARCD3-213ENST00000489503 PKD1P98161 4303 aa8.35□□□□□ -1.07
SMARCD3-213ENST00000489503 DYNC1H1Q14204 4646 aaKnown RBP8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 A0A1B0GVY2 172 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 XKRY2A2RUG3 117 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 GATCO43716 136 aaKnown RBP8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 CTRLP40313 264 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 TNP2Q05952 138 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 OR10J3Q5JRS4 329 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 SOHLH1Q5JUK2 328 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 SH2D6Q7Z4S9 175 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 LINC01551Q86U37 167 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 Q8N3U1 123 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 TNFRSF18Q9Y5U5 241 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
SMARCD3-213ENST00000489503 F5H697 171 aa8.33□□□□□ -1.08
SMARCD3-213ENST00000489503 TIRAPP58753 221 aa8.33□□□□□ -1.08
SMARCD3-213ENST00000489503 ERVFC1-1P60608 527 aa8.33□□□□□ -1.08
SMARCD3-213ENST00000489503 CACNG7P62955 275 aa8.33□□□□□ -1.08
SMARCD3-213ENST00000489503 GTSF1LQ9H1H1 148 aa8.33□□□□□ -1.08
SMARCD3-213ENST00000489503 LY96Q9Y6Y9 160 aa8.33□□□□□ -1.08
SMARCD3-213ENST00000489503 IGHV3-38A0A0C4DH36 116 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 A0A1W2PPQ1 181 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 NDUFS6O75380 124 aaKnown RBP8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 SMIM17P0DL12 118 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 EVI2AP22794 236 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 RAB4BP61018 213 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 LELP1Q5T871 98 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 FAM231DQ6ZW35 169 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 NEXN-AS1Q8NBZ9 246 aa8.32□□□□□ -1.08
SMARCD3-213ENST00000489503 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 F2Z2F3 143 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 NTF3P20783 257 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 UBE2D3P61077 147 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 RPL23P62829 140 aaKnown RBP8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 UBE2D2P62837 147 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 PEA15Q15121 130 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 ADIRFQ15847 76 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 SUMO4Q6EEV6 95 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
SMARCD3-213ENST00000489503 TRBV10-1A0A0K0K1A3 114 aa8.3□□□□□ -1.08
SMARCD3-213ENST00000489503 RPL36AP83881 106 aaKnown RBP8.3□□□□□ -1.08
SMARCD3-213ENST00000489503 TWIST1Q15672 202 aa8.3□□□□□ -1.08
SMARCD3-213ENST00000489503 RPL36ALQ969Q0 106 aaKnown RBP8.3□□□□□ -1.08
SMARCD3-213ENST00000489503 ISOC2Q96AB3 205 aa8.3□□□□□ -1.08
SMARCD3-213ENST00000489503 TRBV7-3A0A075B6L6 115 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 TRGC1P0CF51 173 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 IFITM2Q01629 132 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 TMEM241Q24JQ0 296 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 LINC01556Q5JQF7 62 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 Q6ZRN7 208 aaPredicted RBP8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 OR10G8Q8NGN5 311 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 CNFNQ9BYD5 112 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 NAT8Q9UHE5 227 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms