RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 LYZL1Q6UWQ5 148 aa9.99□□□□□ -0.81
HLA-F-229ENST00000489502 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
HLA-F-229ENST00000489502 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
HLA-F-229ENST00000489502 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
HLA-F-229ENST00000489502 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 K7EQD1 137 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 CRYGDP07320 174 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 RHOHQ15669 191 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 AP1S3Q96PC3 154 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 OSTCQ9NRP0 149 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 LINC00588Q9Y4M8 146 aa9.98□□□□□ -0.81
HLA-F-229ENST00000489502 A0A1W2PPQ1 181 aa9.97□□□□□ -0.81
HLA-F-229ENST00000489502 CIDEAO60543 219 aa9.97□□□□□ -0.81
HLA-F-229ENST00000489502 SRIP30626 198 aa9.97□□□□□ -0.81
HLA-F-229ENST00000489502 C14orf178Q8N769 122 aaPredicted RBP9.97□□□□□ -0.81
HLA-F-229ENST00000489502 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 CCL18P55774 89 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 CACNG7P62955 275 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 ZNF56Q15929 161 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 MRPL23Q16540 153 aaKnown RBP9.96□□□□□ -0.82
HLA-F-229ENST00000489502 ESRGQ1W209 222 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 RNF212Q495C1 297 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 CT83Q5H943 113 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 COMMD7Q86VX2 200 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 C15orf54Q8N8G6 183 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 Q9UF83 564 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 V9GYV3 84 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 KMT2AQ03164 3969 aa9.96□□□□□ -0.82
HLA-F-229ENST00000489502 IGLV2-18A0A075B6J9 118 aa9.95□□□□□ -0.82
HLA-F-229ENST00000489502 A8MWL6 223 aa9.95□□□□□ -0.82
HLA-F-229ENST00000489502 F2Z2F3 143 aa9.95□□□□□ -0.82
HLA-F-229ENST00000489502 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
HLA-F-229ENST00000489502 GAGE12JA6NER3 117 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 MGPP08493 103 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 GAGE1Q13065 139 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 GAGE4Q13068 117 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 GAGE5Q13069 117 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 OR10G8Q8NGN5 311 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 TSKUQ8WUA8 353 aa9.94□□□□□ -0.82
HLA-F-229ENST00000489502 HIGD1CA8MV81 97 aa9.93□□□□□ -0.82
HLA-F-229ENST00000489502 SMIM17P0DL12 118 aa9.93□□□□□ -0.82
HLA-F-229ENST00000489502 ADCYAP1P18509 176 aa9.93□□□□□ -0.82
HLA-F-229ENST00000489502 NTF3P20783 257 aa9.93□□□□□ -0.82
HLA-F-229ENST00000489502 ZNRF2Q8NHG8 242 aa9.93□□□□□ -0.82
HLA-F-229ENST00000489502 CNFNQ9BYD5 112 aa9.93□□□□□ -0.82
HLA-F-229ENST00000489502 MRPS16Q9Y3D3 137 aaKnown RBP9.93□□□□□ -0.82
HLA-F-229ENST00000489502 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
HLA-F-229ENST00000489502 F5H697 171 aa9.92□□□□□ -0.82
HLA-F-229ENST00000489502 M0R2N4 97 aa9.92□□□□□ -0.82
HLA-F-229ENST00000489502 TRGC1P0CF51 173 aa9.92□□□□□ -0.82
HLA-F-229ENST00000489502 LINC00694P0DN24 101 aa9.92□□□□□ -0.82
HLA-F-229ENST00000489502 EVI2AP22794 236 aa9.92□□□□□ -0.82
HLA-F-229ENST00000489502 TWIST1Q15672 202 aa9.92□□□□□ -0.82
HLA-F-229ENST00000489502 UQCC3Q6UW78 93 aa9.92□□□□□ -0.82
HLA-F-229ENST00000489502 FAM3BP58499 235 aaPredicted RBP9.91□□□□□ -0.82
HLA-F-229ENST00000489502 LINC00315P59091 139 aa9.91□□□□□ -0.82
HLA-F-229ENST00000489502 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
HLA-F-229ENST00000489502 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
HLA-F-229ENST00000489502 LINC00862A6NCI5 91 aa9.9□□□□□ -0.82
HLA-F-229ENST00000489502 RAB4BP61018 213 aa9.9□□□□□ -0.82
HLA-F-229ENST00000489502 WDR73Q6P4I2 378 aa9.9□□□□□ -0.82
HLA-F-229ENST00000489502 BORCS7Q96B45 105 aa9.9□□□□□ -0.82
HLA-F-229ENST00000489502 UPK3BQ9BT76 320 aa9.9□□□□□ -0.82
HLA-F-229ENST00000489502 TMEM218A2RU14 115 aa9.89□□□□□ -0.83
HLA-F-229ENST00000489502 F8W036 122 aa9.89□□□□□ -0.83
HLA-F-229ENST00000489502 FOXA3P55318 350 aaPredicted RBP9.89□□□□□ -0.83
HLA-F-229ENST00000489502 PNRC1Q12796 327 aaPredicted RBP9.89□□□□□ -0.83
HLA-F-229ENST00000489502 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
HLA-F-229ENST00000489502 NUP35Q8NFH5 326 aa9.89□□□□□ -0.83
HLA-F-229ENST00000489502 ATP6V0E2Q8NHE4 81 aa9.89□□□□□ -0.83
HLA-F-229ENST00000489502 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
HLA-F-229ENST00000489502 A0A1B0GUT8 65 aa9.88□□□□□ -0.83
HLA-F-229ENST00000489502 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
HLA-F-229ENST00000489502 SH2D6Q7Z4S9 175 aa9.88□□□□□ -0.83
HLA-F-229ENST00000489502 WFDC10BQ8IUB3 73 aa9.88□□□□□ -0.83
HLA-F-229ENST00000489502 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
HLA-F-229ENST00000489502 TRBV10-1A0A0K0K1A3 114 aa9.87□□□□□ -0.83
HLA-F-229ENST00000489502 SMIM27A0A1W2PRY6 76 aa9.87□□□□□ -0.83
HLA-F-229ENST00000489502 RPL36AP83881 106 aaKnown RBP9.87□□□□□ -0.83
HLA-F-229ENST00000489502 RPL36ALQ969Q0 106 aaKnown RBP9.87□□□□□ -0.83
HLA-F-229ENST00000489502 KRTAP1-5Q9BYS1 174 aa9.87□□□□□ -0.83
HLA-F-229ENST00000489502 Q9H8V8 135 aa9.87□□□□□ -0.83
HLA-F-229ENST00000489502 NAT8BQ9UHF3 227 aa9.87□□□□□ -0.83
HLA-F-229ENST00000489502 TRAV26-2A0A0B4J265 109 aa9.86□□□□□ -0.83
HLA-F-229ENST00000489502 NBDYA0A0U1RRE5 68 aa9.86□□□□□ -0.83
HLA-F-229ENST00000489502 Q6ZR54 194 aa9.86□□□□□ -0.83
HLA-F-229ENST00000489502 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
HLA-F-229ENST00000489502 GTSF1LQ9H1H1 148 aa9.86□□□□□ -0.83
HLA-F-229ENST00000489502 TRBV7-3A0A075B6L6 115 aa9.85□□□□□ -0.83
HLA-F-229ENST00000489502 IGHV3-38A0A0C4DH36 116 aa9.85□□□□□ -0.83
HLA-F-229ENST00000489502 M0QY20 66 aa9.85□□□□□ -0.83
HLA-F-229ENST00000489502 SIVA1O15304 175 aa9.85□□□□□ -0.83
HLA-F-229ENST00000489502 TIRAPP58753 221 aa9.85□□□□□ -0.83
HLA-F-229ENST00000489502 UBE2D3P61077 147 aa9.85□□□□□ -0.83
HLA-F-229ENST00000489502 UBE2D2P62837 147 aa9.85□□□□□ -0.83
HLA-F-229ENST00000489502 H7C1H1 209 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms