RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RNASE3P12724 160 aaKnown RBP6.3□□□□□ -1.4
VTI1A-207ENST00000489357 CDKN1BP46527 198 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 SYNJ2BPP57105 145 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 LAGE3Q14657 143 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 SLC25A34Q6PIV7 304 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 Q6ZSV7 163 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 SYT8Q8NBV8 401 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 GOLT1BQ9Y3E0 138 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 TRGV11A0A075B6L2 103 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 TCAPO15273 167 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 DLEU1O43261 78 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 NCR2O95944 276 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 SMIM17P0DL12 118 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 SUMO2P61956 95 aaKnown RBP6.29□□□□□ -1.4
VTI1A-207ENST00000489357 TCTEX1D4Q5JR98 221 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 C12orf54Q6X4T0 127 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 LINC00173Q6ZV60 143 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 ATOH7Q8N100 152 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 OR9G4Q8NGQ1 327 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 LINC01006Q8NI28 216 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 MGAM2Q2M2H8 2515 aa6.29□□□□□ -1.4
VTI1A-207ENST00000489357 MUC21A0A0G2JKD1 596 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 MUC21A0A140T8X8 626 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 SMKR1H3BMG3 65 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 SIVA1O15304 175 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 ZNF688P0C7X2 276 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 PRB4P10163 310 aaPredicted RBP6.28□□□□□ -1.4
VTI1A-207ENST00000489357 COX8AP10176 69 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 HLA-DRB4P13762 266 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 PROK1P58294 105 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 MUC21Q5SSG8 566 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 C10orf99Q6UWK7 81 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 PTH2Q96A98 100 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 C9orf85Q96MD7 179 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 SPAG8Q99932 426 aaPredicted RBP6.28□□□□□ -1.4
VTI1A-207ENST00000489357 LINC00467Q9BRT7 94 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 HLA-DRB4X5D2U9 266 aa6.28□□□□□ -1.4
VTI1A-207ENST00000489357 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 TRBV6-5A0A0K0K1A5 114 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 A0A1B0GV90 55 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 F6UB75 175 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 CMC4P56277 68 aaPredicted RBP6.27□□□□□ -1.41
VTI1A-207ENST00000489357 GAGE1Q13065 139 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 LINC00469Q8N7U9 141 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 EDA2RQ9HAV5 297 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
VTI1A-207ENST00000489357 TRRAPQ9Y4A5 3859 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 IGKV3-7A0A075B6H7 116 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 IGHV3-16A0A0C4DH30 117 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 hDV102S1A0JD36 115 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.26□□□□□ -1.41
VTI1A-207ENST00000489357 CD7P09564 240 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 PLNP26678 52 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 KRTAP10-3P60369 221 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 FHL3Q13643 280 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 MAJINQ3KP22 176 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 PRR31Q5SQ13 230 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 AMTNQ6UX39 209 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 OR11H1Q8NG94 326 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 RASL10AQ92737 203 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 TOMM6Q96B49 74 aa6.26□□□□□ -1.41
VTI1A-207ENST00000489357 ZNF256Q9Y2P7 627 aaPredicted RBP6.26□□□□□ -1.41
VTI1A-207ENST00000489357 TRAV12-3A0A0B4J271 114 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 GNRH2O43555 120 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 DPM2O94777 84 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 ODF1Q14990 250 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 BOD1L2Q8IYS8 172 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 C14orf178Q8N769 122 aaPredicted RBP6.25□□□□□ -1.41
VTI1A-207ENST00000489357 C3orf56Q8N813 242 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 CITED1Q99966 193 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 FAM110AQ9BQ89 295 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 VWFP04275 2813 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
VTI1A-207ENST00000489357 A0A087WX48 190 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 H3BMM0 161 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 H7C1H1 209 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 J3KRW8 73 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 VCYO14598 125 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 NUDT3O95989 172 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 IGKCP01834 107 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 PRSS1P07477 247 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 EDN2P20800 178 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 LINC00315P59091 139 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 PAPPA-AS1Q5QFB9 102 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 ADAMTSL5Q6ZMM2 481 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 Q6ZQT7 251 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 ERASQ7Z444 233 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 KLHL30-AS1Q8NEE0 82 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 DYNLRB2Q8TF09 96 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 KIR2DL4Q99706 377 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 TIMM8BQ9Y5J9 83 aaPredicted RBP6.24□□□□□ -1.41
VTI1A-207ENST00000489357 CMYA5Q8N3K9 4069 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 NOTCH3Q9UM47 2321 aa6.24□□□□□ -1.41
VTI1A-207ENST00000489357 TRAV26-2A0A0B4J265 109 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 TRBV27A0A0K0K1C4 114 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms