RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 C19orf54Q5BKX5 351 aa14.72□□□□□ -0.05
HMG20B-213ENST00000488973 APRG1Q8IVJ8 170 aa14.72□□□□□ -0.05
HMG20B-213ENST00000488973 TRAV41A0A0B4J266 112 aa14.72□□□□□ -0.05
HMG20B-213ENST00000488973 IGHV1-69DA0A0B4J2H0 117 aa14.72□□□□□ -0.05
HMG20B-213ENST00000488973 LINC01549A6NIU2 74 aa14.72□□□□□ -0.05
HMG20B-213ENST00000488973 PAPPA-AS1Q5QFB9 102 aa14.72□□□□□ -0.05
HMG20B-213ENST00000488973 KIR2DL4Q99706 377 aa14.72□□□□□ -0.05
HMG20B-213ENST00000488973 SRSF9Q13242 221 aaKnown RBP eCLIP14.71□□□□□ -0.05
HMG20B-213ENST00000488973 MEIG1Q5JSS6 88 aa14.71□□□□□ -0.05
HMG20B-213ENST00000488973 FAM159AQ6UWV7 190 aa14.71□□□□□ -0.05
HMG20B-213ENST00000488973 PLEKHB2Q96CS7 222 aa14.71□□□□□ -0.05
HMG20B-213ENST00000488973 NPFFO15130 113 aa14.71□□□□□ -0.06
HMG20B-213ENST00000488973 SNCGO76070 127 aa14.71□□□□□ -0.06
HMG20B-213ENST00000488973 CRYGDP07320 174 aa14.71□□□□□ -0.06
HMG20B-213ENST00000488973 LY6DQ14210 128 aa14.71□□□□□ -0.06
HMG20B-213ENST00000488973 MED13LQ71F56 2210 aa14.7□□□□□ -0.06
HMG20B-213ENST00000488973 DNAJC30Q96LL9 226 aa14.7□□□□□ -0.06
HMG20B-213ENST00000488973 NDUFA4O00483 81 aa14.7□□□□□ -0.06
HMG20B-213ENST00000488973 RNASE3P12724 160 aaKnown RBP14.7□□□□□ -0.06
HMG20B-213ENST00000488973 CRIP2P52943 208 aaPredicted RBP14.7□□□□□ -0.06
HMG20B-213ENST00000488973 SPTA1P02549 2419 aa14.69□□□□□ -0.06
HMG20B-213ENST00000488973 MUC4Q99102 2169 aa14.69□□□□□ -0.06
HMG20B-213ENST00000488973 A4D1N5 150 aa14.69□□□□□ -0.06
HMG20B-213ENST00000488973 DUSP14O95147 198 aaKnown RBP14.69□□□□□ -0.06
HMG20B-213ENST00000488973 NXPH4O95158 308 aa14.69□□□□□ -0.06
HMG20B-213ENST00000488973 RNASE4P34096 147 aaKnown RBP14.69□□□□□ -0.06
HMG20B-213ENST00000488973 UNQ9165/PRO28630Q6UXU0 137 aa14.69□□□□□ -0.06
HMG20B-213ENST00000488973 MDFICQ9P1T7 246 aa14.69□□□□□ -0.06
HMG20B-213ENST00000488973 IGHV4OR15-8A0A075B7B6 117 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 A0A087WW49 117 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 CD7P09564 240 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 UBE2D3P61077 147 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 HERVK_113P61574 105 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 UBE2D2P62837 147 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 MOB4Q9Y3A3 225 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 IGLV4-69A0A075B6H9 119 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 GNRH2O43555 120 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 LYRM7Q5U5X0 104 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 SBSPONQ8IVN8 264 aa14.68□□□□□ -0.06
HMG20B-213ENST00000488973 C11orf86A6NJI1 115 aa14.67□□□□□ -0.06
HMG20B-213ENST00000488973 KIF25-AS1Q9Y6Z4 181 aa14.67□□□□□ -0.06
HMG20B-213ENST00000488973 SMIM9A6NGZ8 99 aa14.67□□□□□ -0.06
HMG20B-213ENST00000488973 TSHBP01222 138 aa14.67□□□□□ -0.06
HMG20B-213ENST00000488973 KLHL30-AS1Q8NEE0 82 aa14.67□□□□□ -0.06
HMG20B-213ENST00000488973 A0A0J9YY99 117 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 IGIPA6NJ69 53 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 LINC00315P59091 139 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 PSMB2P49721 201 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 DEFB1P60022 68 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 PMVKQ15126 192 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 TMEM219Q86XT9 240 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 TP53TG1Q9Y2A0 90 aa14.66□□□□□ -0.06
HMG20B-213ENST00000488973 LOC107984156A0A0G2JMH3 177 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 LMO4P61968 165 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 ARL17AQ8IVW1 177 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 TMEM141Q96I45 108 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 TRBV12-3P01733 135 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 POLR2KP53803 58 aaKnown RBP14.65□□□□□ -0.06
HMG20B-213ENST00000488973 ZFP2Q6ZN57 461 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 NDUFA11Q86Y39 141 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 LINC00527Q9UJ94 153 aa14.65□□□□□ -0.06
HMG20B-213ENST00000488973 NCOR2Q9Y618 2525 aa14.64□□□□□ -0.07
HMG20B-213ENST00000488973 TRAV4A0A0B4J268 109 aa14.64□□□□□ -0.07
HMG20B-213ENST00000488973 A0A1W2PPR1 153 aa14.64□□□□□ -0.07
HMG20B-213ENST00000488973 TIMM17AQ99595 171 aa14.63□□□□□ -0.07
HMG20B-213ENST00000488973 SVEP1Q4LDE5 3571 aa14.63□□□□□ -0.07
HMG20B-213ENST00000488973 F6UB75 175 aa14.63□□□□□ -0.07
HMG20B-213ENST00000488973 VCYO14598 125 aa14.63□□□□□ -0.07
HMG20B-213ENST00000488973 RELNP78509 3460 aa14.62□□□□□ -0.07
HMG20B-213ENST00000488973 A8MWV9 139 aa14.62□□□□□ -0.07
HMG20B-213ENST00000488973 RPL11P62913 178 aaKnown RBP14.62□□□□□ -0.07
HMG20B-213ENST00000488973 SLC25A29Q8N8R3 303 aa14.62□□□□□ -0.07
HMG20B-213ENST00000488973 PIEZO1Q92508 2521 aa14.61□□□□□ -0.07
HMG20B-213ENST00000488973 IGHV3-30P01768 117 aa14.61□□□□□ -0.07
HMG20B-213ENST00000488973 IGHV3-30-5P0DP03 117 aa14.61□□□□□ -0.07
HMG20B-213ENST00000488973 SUMO4Q6EEV6 95 aa14.61□□□□□ -0.07
HMG20B-213ENST00000488973 USMG5Q96IX5 58 aa14.61□□□□□ -0.07
HMG20B-213ENST00000488973 BPESC1Q9GZL8 116 aa14.61□□□□□ -0.07
HMG20B-213ENST00000488973 KLLNB2CW77 178 aa14.6□□□□□ -0.07
HMG20B-213ENST00000488973 EMP1P54849 157 aa14.6□□□□□ -0.07
HMG20B-213ENST00000488973 SFTA2Q6UW10 78 aa14.6□□□□□ -0.07
HMG20B-213ENST00000488973 ATRXP46100 2492 aa14.6□□□□□ -0.07
HMG20B-213ENST00000488973 SPTBN1Q01082 2364 aaKnown RBP14.6□□□□□ -0.07
HMG20B-213ENST00000488973 H3BUA1 57 aa14.6□□□□□ -0.07
HMG20B-213ENST00000488973 ASH1LQ9NR48 2969 aaKnown RBP14.59□□□□□ -0.07
HMG20B-213ENST00000488973 CFC1BP0CG36 223 aa14.59□□□□□ -0.07
HMG20B-213ENST00000488973 CFC1P0CG37 223 aa14.59□□□□□ -0.07
HMG20B-213ENST00000488973 ZNF876PQ49A33 203 aa14.59□□□□□ -0.07
HMG20B-213ENST00000488973 LINC01587Q99440 93 aa14.59□□□□□ -0.07
HMG20B-213ENST00000488973 RPL39P62891 51 aaKnown RBP14.58□□□□□ -0.07
HMG20B-213ENST00000488973 C10orf126Q8N4M7 172 aa14.58□□□□□ -0.07
HMG20B-213ENST00000488973 TCL1BO95988 128 aa14.58□□□□□ -0.08
HMG20B-213ENST00000488973 TSPEAR-AS2P59090 65 aa14.58□□□□□ -0.08
HMG20B-213ENST00000488973 Q6ZS46 218 aa14.58□□□□□ -0.08
HMG20B-213ENST00000488973 TRBV27A0A0K0K1C4 114 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 CRLF1O75462 422 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 TMEM170BQ5T4T1 132 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 RHPN1-AS1Q9BWJ2 59 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 UBTD1Q9HAC8 227 aa14.57□□□□□ -0.08
HMG20B-213ENST00000488973 CHD8Q9HCK8 2581 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms