RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 UBA52P62987 128 aaKnown RBP1.71□□□□□ -2.14
PRPF4-203ENST00000488937 UBE2L3P68036 154 aaKnown RBP1.71□□□□□ -2.14
PRPF4-203ENST00000488937 Q0VG73 95 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 C9orf116Q5BN46 136 aaPredicted RBP1.71□□□□□ -2.14
PRPF4-203ENST00000488937 SLC48A1Q6P1K1 146 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 TMEM106BQ9NUM4 274 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 C22orf24Q9Y442 160 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 PPLO60437 1756 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 ABCC5O15440 1437 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 ARAP2Q8WZ64 1704 aa1.71□□□□□ -2.14
PRPF4-203ENST00000488937 PXDNLA1KZ92 1463 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 KDM6BO15054 1643 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 KIAA0100Q14667 2235 aaKnown RBP1.7□□□□□ -2.14
PRPF4-203ENST00000488937 H3BRN7 92 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 LINC00032P0C843 101 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 IGLC1P0CG04 106 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 RNASE2P10153 161 aaKnown RBP1.7□□□□□ -2.14
PRPF4-203ENST00000488937 ATP5EP56381 51 aaPredicted RBP1.7□□□□□ -2.14
PRPF4-203ENST00000488937 UBE2G1P62253 170 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 PYY3Q5JQD4 70 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 HCP5Q6MZN7 132 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 LYPD5Q6UWN5 251 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 NDUFA11Q86Y39 141 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 LINC00304Q8N9R0 145 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 ORMDL1Q9P0S3 153 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 LAMC3Q9Y6N6 1575 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 TNRC6BQ9UPQ9 1833 aaKnown RBP1.7□□□□□ -2.14
PRPF4-203ENST00000488937 COL1A2P08123 1366 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 RGPD4Q7Z3J3 1758 aa1.7□□□□□ -2.14
PRPF4-203ENST00000488937 CCDC18Q5T9S5 1454 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 TRBV6-8A0A0A6YYG3 113 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 TRGV4A0A0C4DH28 118 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 CCKP06307 115 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 POLR2JP52435 117 aaKnown RBP1.69□□□□□ -2.14
PRPF4-203ENST00000488937 C10orf55Q5SWW7 151 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 CSAG1Q6PB30 78 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 COMMD6Q7Z4G1 85 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 ODF3Q96PU9 254 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 TTTY12Q9BZ98 90 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 Q9H521 79 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 DLEC1Q9Y238 1755 aa1.69□□□□□ -2.14
PRPF4-203ENST00000488937 MARF1Q9Y4F3 1742 aaKnown RBP1.69□□□□□ -2.14
PRPF4-203ENST00000488937 PSME4Q14997 1843 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 MED12Q93074 2177 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 ICE1Q9Y2F5 2266 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 ABCC3O15438 1527 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 HMGXB3Q12766 1538 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 TRAV17A0A0B4J275 112 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 TMEM30CPA0ZSE6 113 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 F8W1H4 67 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 NUPR1O60356 82 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 IGHV3-30P01768 117 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 IGHV3-30-5P0DP03 117 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 RBM3P98179 157 aaKnown RBP1.68□□□□□ -2.14
PRPF4-203ENST00000488937 ESPL1Q14674 2120 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 LCN9Q8WX39 176 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 VAMP8Q9BV40 100 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 MRPL35Q9NZE8 188 aaKnown RBP1.68□□□□□ -2.14
PRPF4-203ENST00000488937 AP4S1Q9Y587 144 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 ADGRB2O60241 1585 aa1.68□□□□□ -2.14
PRPF4-203ENST00000488937 RGPD3A6NKT7 1758 aaPredicted RBP1.67□□□□□ -2.14
PRPF4-203ENST00000488937 SCAPERQ9BY12 1400 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 GBF1Q92538 1859 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 PRDM15P57071 1507 aaPredicted RBP1.67□□□□□ -2.14
PRPF4-203ENST00000488937 IGKV3-7A0A075B6H7 116 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 PIGBOS1A0A0B4J2F0 54 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 TRBV6-4A0A1B0GX49 114 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 NUPR2A6NF83 97 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 IGLV3-19P01714 112 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 IGKCP01834 107 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 PRB2P02812 416 aaPredicted RBP1.67□□□□□ -2.14
PRPF4-203ENST00000488937 S100A7L2Q5SY68 101 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 Q6ZRN7 208 aaPredicted RBP1.67□□□□□ -2.14
PRPF4-203ENST00000488937 LINC00299Q6ZSB3 139 aa1.67□□□□□ -2.14
PRPF4-203ENST00000488937 NRXN2Q9P2S2 1712 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 ARFGEF1Q9Y6D6 1849 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 TRBV10-1A0A0K0K1A3 114 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 TRBV10-3A0A0K0K1G6 114 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 IL7P13232 177 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 CCL8P80075 99 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 UNQ5815/PRO19632Q6UWF5 114 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 DMAC1Q96GE9 116 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 TXNDC17Q9BRA2 123 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 NPVFQ9HCQ7 196 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 LINC00474Q9P2X8 69 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 PXDNQ92626 1479 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 NESP48681 1621 aa1.66□□□□□ -2.14
PRPF4-203ENST00000488937 ANKRD36BQ8N2N9 1353 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 HCG22E2RYF7 251 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 IGLV3-1P01715 115 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 PRB4P10163 310 aaPredicted RBP1.65□□□□□ -2.15
PRPF4-203ENST00000488937 PDE6GP18545 87 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 SNCAP37840 140 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 C15orf53Q8NAA6 179 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 C10orf82Q8WW14 230 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 CYP4F30PQ9H0H9 118 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 ATG5Q9H1Y0 275 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 PRO1933Q9H354 126 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms