RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 FAM210AQ96ND0 272 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 TCEAL7Q9BRU2 100 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 SSBP4Q9BWG4 385 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-212ENST00000488774 PRO0255Q9UI72 69 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 NBDYA0A0U1RRE5 68 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 H3BNG1 76 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 GAS8-AS1O95177 125 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 CEBPGP53567 150 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 BLOC1S1P78537 153 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 EIF5AL1Q6IS14 154 aaKnown RBP4.42□□□□□ -1.7
PTPRD-212ENST00000488774 Q6ZRN7 208 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-212ENST00000488774 UBE2DNLQ8IWF7 75 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 DEFB104AQ8WTQ1 72 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 SFRP2Q96HF1 295 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 MRPS16Q9Y3D3 137 aaKnown RBP4.42□□□□□ -1.7
PTPRD-212ENST00000488774 HERC2O95714 4834 aa4.42□□□□□ -1.7
PTPRD-212ENST00000488774 PDE6DO43924 150 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 S100A4P26447 101 aaKnown RBP4.41□□□□□ -1.7
PTPRD-212ENST00000488774 GNG4P50150 75 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 FAM74A4Q5TZK3 123 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 LYZL1Q6UWQ5 148 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 OR2D3Q8NGH3 330 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 UPK3BQ9BT76 320 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 Q9H8V8 135 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 ICOSQ9Y6W8 199 aa4.41□□□□□ -1.7
PTPRD-212ENST00000488774 GAGE12JA6NER3 117 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 S100A9P06702 114 aaKnown RBP4.4□□□□□ -1.71
PTPRD-212ENST00000488774 OR5AL1P0C617 328 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 GAGE1Q13065 139 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 GAGE4Q13068 117 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 GAGE5Q13069 117 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 GAGE13Q4V321 117 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 LINC01551Q86U37 167 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 NEXN-AS1Q8NBZ9 246 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 RYR1P21817 5038 aa4.4□□□□□ -1.71
PTPRD-212ENST00000488774 IGHV3-38A0A0C4DH36 116 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 TRBV6-4A0A1B0GX49 114 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 TMEM250H0YL14 139 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 EREGO14944 169 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 IFNA1P01562 189 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 CXCL1P09341 107 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 MED14OSP0DP75 135 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 EVI2AP22794 236 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 CCL18P55774 89 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
PTPRD-212ENST00000488774 MRPL23Q16540 153 aaKnown RBP4.39□□□□□ -1.71
PTPRD-212ENST00000488774 NTM-AS1Q6ZSK4 140 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 TXNDC17Q9BRA2 123 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 TPPP3Q9BW30 176 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 EIF5A2Q9GZV4 153 aaKnown RBP4.39□□□□□ -1.71
PTPRD-212ENST00000488774 PHLDA3Q9Y5J5 127 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 V9GYV3 84 aa4.39□□□□□ -1.71
PTPRD-212ENST00000488774 FAT1Q14517 4588 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 PRSS29PA6NIE9 313 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 A8MWV9 139 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 P01737 135 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 DNAH10OSP0CZ25 163 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 ADCYAP1P18509 176 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 NTF3P20783 257 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 SRIP30626 198 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 CTRLP40313 264 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 KRTAP10-2P60368 255 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 WFDC2Q14508 124 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 PIK3CD-AS1Q5SR53 167 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 ZFP2Q6ZN57 461 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 NEGR1Q7Z3B1 354 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 ZFP82Q8N141 532 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 FER1L6-AS1Q8NA97 138 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 ISOC2Q96AB3 205 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 SMIM7Q9BQ49 75 aa4.38□□□□□ -1.71
PTPRD-212ENST00000488774 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
PTPRD-212ENST00000488774 ZNF727A8MUV8 499 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 M0QY20 66 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 SIVA1O15304 175 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 IGHV3-30P01768 117 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 IGHV3-33P01772 117 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 IGHV3-30-3P0DP02 117 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 IGHV3-30-5P0DP03 117 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 UBE2D3P61077 147 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 UBE2D2P62837 147 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 RHOHQ15669 191 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 C6orf223Q8N319 242 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 MAPKAPK5-AS1Q8N8E1 139 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 ATP6V0E2Q8NHE4 81 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 SMIM12Q96EX1 92 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 PGLYRP4Q96LB8 373 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 CNFNQ9BYD5 112 aa4.37□□□□□ -1.71
PTPRD-212ENST00000488774 GATCO43716 136 aaKnown RBP4.36□□□□□ -1.71
PTPRD-212ENST00000488774 FAM3BP58499 235 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-212ENST00000488774 SLAQ13239 276 aa4.36□□□□□ -1.71
PTPRD-212ENST00000488774 ZNF56Q15929 161 aa4.36□□□□□ -1.71
PTPRD-212ENST00000488774 SPANXN1Q5VSR9 72 aa4.36□□□□□ -1.71
PTPRD-212ENST00000488774 FAM231DQ6ZW35 169 aa4.36□□□□□ -1.71
PTPRD-212ENST00000488774 DAZ4Q86SG3 579 aaKnown RBP4.36□□□□□ -1.71
PTPRD-212ENST00000488774 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms