RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 KIR2DL5AQ8N109 375 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 C1orf158Q8N1D5 194 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 KIR2DL5BQ8NHK3 375 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 SPXQ9BT56 116 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 TP53TG3Q9ULZ0 132 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 IGHV3OR16-12A0A075B7B8 117 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 PPBPP02775 128 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 SMIM17P0DL12 118 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 Q0VG73 95 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 OR10J3Q5JRS4 329 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 COA6Q5JTJ3 125 aaKnown RBP8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 PTH2Q96A98 100 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 MSRB1Q9NZV6 116 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 MDFICQ9P1T7 246 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 HECTD4Q9Y4D8 3996 aa8.73□□□□□ -1.01
HLA-DOB-209ENST00000488325 GIG44P09565 113 aaPredicted RBP8.72□□□□□ -1.01
HLA-DOB-209ENST00000488325 SNRPEP62304 92 aaKnown RBP8.72□□□□□ -1.01
HLA-DOB-209ENST00000488325 PIK3CD-AS1Q5SR53 167 aa8.72□□□□□ -1.01
HLA-DOB-209ENST00000488325 BAGE3Q86Y29 109 aa8.72□□□□□ -1.01
HLA-DOB-209ENST00000488325 ALKBH7Q9BT30 221 aaPredicted RBP8.72□□□□□ -1.01
HLA-DOB-209ENST00000488325 DPH3P1Q9H4G8 78 aa8.72□□□□□ -1.01
HLA-DOB-209ENST00000488325 C5orf52A6NGY3 159 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 M0R2P5 195 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 UBE2CO00762 179 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 RAB4AP20338 218 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 EVI2AP22794 236 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 CKS2P33552 79 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 RRN3P1Q2M238 152 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 MRPL51Q4U2R6 128 aaKnown RBP8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 ORMDL3Q8N138 153 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 CSNK1G2-AS1Q8NCQ2 148 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 TMEM263Q8WUH6 116 aaKnown RBP8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 C16orf74Q96GX8 76 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
HLA-DOB-209ENST00000488325 HOXA5P20719 270 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 ZNF705AQ6ZN79 300 aaPredicted RBP8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 C18orf32Q8TCD1 76 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 MRAP2Q96G30 205 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 RNF185Q96GF1 192 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 GSN-AS1Q9NRJ2 163 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 LAMTOR2Q9Y2Q5 125 aa8.7□□□□□ -1.02
HLA-DOB-209ENST00000488325 D6R8Y8 96 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 SPRY2O43597 315 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 MGPP08493 103 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 S100A2P29034 98 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 C14orf178Q8N769 122 aaPredicted RBP8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 C11orf72Q8NBR9 251 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 RNASE8Q8TDE3 154 aaKnown RBP8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 LINC00476Q8WZB0 136 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 TM2D3Q9BRN9 247 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 DNAH10Q8IVF4 4471 aa8.69□□□□□ -1.02
HLA-DOB-209ENST00000488325 SMIM9A6NGZ8 99 aa8.68□□□□□ -1.02
HLA-DOB-209ENST00000488325 A8MWV9 139 aa8.68□□□□□ -1.02
HLA-DOB-209ENST00000488325 PPP1R17O96001 155 aa8.68□□□□□ -1.02
HLA-DOB-209ENST00000488325 IGHV4-30-4P0DP06 118 aa8.68□□□□□ -1.02
HLA-DOB-209ENST00000488325 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
HLA-DOB-209ENST00000488325 A8MZ25 164 aa8.67□□□□□ -1.02
HLA-DOB-209ENST00000488325 AZU1P20160 251 aa8.67□□□□□ -1.02
HLA-DOB-209ENST00000488325 HIST3H2BBQ8N257 126 aa8.67□□□□□ -1.02
HLA-DOB-209ENST00000488325 POM121L12Q8N7R1 296 aa8.67□□□□□ -1.02
HLA-DOB-209ENST00000488325 RHODO00212 210 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 SERF1AO75920 110 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 NCR2O95944 276 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 PRM2P04554 102 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 ESDP10768 282 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 DAZ2Q13117 558 aaKnown RBP8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 IQCJQ1A5X6 159 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 LGALS9BQ3B8N2 356 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 IL17DQ8TAD2 202 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 TMEM18Q96B42 140 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 MAP1LC3AQ9H492 121 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 KIF25-AS1Q9Y6Z4 181 aa8.66□□□□□ -1.02
HLA-DOB-209ENST00000488325 F5H697 171 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 TNFRSF6BO95407 300 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 LY6G6CO95867 125 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 Q6ZWC4 215 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 PRSS3P2Q8NHM4 247 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 RASL10AQ92737 203 aa8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 CHCHD1Q96BP2 118 aaKnown RBP8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.02
HLA-DOB-209ENST00000488325 MUC4Q99102 2169 aa8.65□□□□□ -1.03
HLA-DOB-209ENST00000488325 A0A087WWL8 130 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 H7C1H1 209 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 HSBP1O75506 76 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 NPYP01303 97 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 CRYGDP07320 174 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 ZNF56Q15929 161 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 PDZD11Q5EBL8 140 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 RNASEKQ6P5S7 137 aaKnown RBP8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 NIT1Q86X76 327 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 OVOL2Q9BRP0 275 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 JPT2Q9H910 190 aa8.64□□□□□ -1.03
HLA-DOB-209ENST00000488325 RS1O15537 224 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms