RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 IGHV3OR16-10A0A075B7F0 116 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 A4D1N5 150 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 TRBV12-3P01733 135 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 IGHV3-30P01768 117 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 IGHV4-39P01824 125 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 IGHV3-30-5P0DP03 117 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 ZFAND6Q6FIF0 208 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 C10orf126Q8N4M7 172 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 ZNF580Q9UK33 172 aa10.71□□□□□ -0.7
COL16A1-214ENST00000488128 IGHV4-4A0A075B6R2 117 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 SLC25A20O43772 301 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 Q1RN00 199 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 LINC01619G3V211 115 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 KLRB1Q12918 225 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 GPHB5Q86YW7 130 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 Q8N6K4 173 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 PRO1854Q9UHT4 67 aa10.7□□□□□ -0.7
COL16A1-214ENST00000488128 A0A1W2PPR1 153 aa10.69□□□□□ -0.7
COL16A1-214ENST00000488128 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
COL16A1-214ENST00000488128 NACAE9PAV3 2078 aa10.69□□□□□ -0.7
COL16A1-214ENST00000488128 EIF4EBP3O60516 100 aaPredicted RBP10.69□□□□□ -0.7
COL16A1-214ENST00000488128 IGHV3-11P01762 117 aa10.68□□□□□ -0.7
COL16A1-214ENST00000488128 FAM110DQ8TAY7 271 aaPredicted RBP10.68□□□□□ -0.7
COL16A1-214ENST00000488128 NTN5Q8WTR8 489 aaPredicted RBP10.68□□□□□ -0.7
COL16A1-214ENST00000488128 ITPR1Q14643 2758 aa10.68□□□□□ -0.7
COL16A1-214ENST00000488128 HERVK_113P61574 105 aa10.68□□□□□ -0.7
COL16A1-214ENST00000488128 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
COL16A1-214ENST00000488128 OR10J6PQ8NGY7 276 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 TRAV21A0A0B4J279 112 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 TEX49A0A1B0GTD5 131 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 LY6DQ14210 128 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 J3QQQ9 107 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 IGKV3-20P01619 116 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
COL16A1-214ENST00000488128 NPC2P61916 151 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 PMVKQ15126 192 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 C11orf71Q6IPW1 123 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
COL16A1-214ENST00000488128 CELSR2Q9HCU4 2923 aa10.66□□□□□ -0.7
COL16A1-214ENST00000488128 LGALS3P17931 250 aaKnown RBP10.66□□□□□ -0.7
COL16A1-214ENST00000488128 LYRM7Q5U5X0 104 aa10.66□□□□□ -0.7
COL16A1-214ENST00000488128 EEF1AKMT3Q96AZ1 226 aa10.66□□□□□ -0.7
COL16A1-214ENST00000488128 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
COL16A1-214ENST00000488128 SAA4P35542 130 aa10.65□□□□□ -0.7
COL16A1-214ENST00000488128 PRRC2AP48634 2157 aaKnown RBP10.65□□□□□ -0.7
COL16A1-214ENST00000488128 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
COL16A1-214ENST00000488128 CCDC179H3BU77 68 aa10.65□□□□□ -0.7
COL16A1-214ENST00000488128 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
COL16A1-214ENST00000488128 MUSTN1Q8IVN3 82 aa10.65□□□□□ -0.7
COL16A1-214ENST00000488128 M0R1W7 72 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 PRSS2P07478 247 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 EDN2P20800 178 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 GAGE2BQ13066 116 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 GAGE5Q13069 117 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 GAGE6Q13070 117 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 GAGE2EQ4V326 116 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 Q6ZSV7 163 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 C3orf56Q8N813 242 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 GAGE2DQ9UEU5 116 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 HIVEP3Q5T1R4 2406 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 SNCGO76070 127 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 UBTD1Q9HAC8 227 aa10.64□□□□□ -0.71
COL16A1-214ENST00000488128 Q8N1Y9 231 aa10.63□□□□□ -0.71
COL16A1-214ENST00000488128 UCNP55089 124 aa10.63□□□□□ -0.71
COL16A1-214ENST00000488128 AMELXQ99217 191 aa10.63□□□□□ -0.71
COL16A1-214ENST00000488128 TRAV12-3A0A0B4J271 114 aa10.63□□□□□ -0.71
COL16A1-214ENST00000488128 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
COL16A1-214ENST00000488128 RNASE13Q5GAN3 156 aaKnown RBP10.63□□□□□ -0.71
COL16A1-214ENST00000488128 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
COL16A1-214ENST00000488128 LINC00477Q96M19 166 aa10.63□□□□□ -0.71
COL16A1-214ENST00000488128 LINC00315P59091 139 aa10.62□□□□□ -0.71
COL16A1-214ENST00000488128 EBI3Q14213 229 aa10.62□□□□□ -0.71
COL16A1-214ENST00000488128 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
COL16A1-214ENST00000488128 TTC32Q5I0X7 151 aa10.61□□□□□ -0.71
COL16A1-214ENST00000488128 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
COL16A1-214ENST00000488128 TRAV12-2A0A075B6T6 113 aa10.61□□□□□ -0.71
COL16A1-214ENST00000488128 NDUFV3P56181 108 aaKnown RBP10.61□□□□□ -0.71
COL16A1-214ENST00000488128 CITED1Q99966 193 aa10.61□□□□□ -0.71
COL16A1-214ENST00000488128 SPXQ9BT56 116 aa10.61□□□□□ -0.71
COL16A1-214ENST00000488128 VCX2Q9H322 139 aa10.61□□□□□ -0.71
COL16A1-214ENST00000488128 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
COL16A1-214ENST00000488128 TMEM262E9PQX1 116 aa10.6□□□□□ -0.71
COL16A1-214ENST00000488128 ZNF56Q15929 161 aa10.6□□□□□ -0.71
COL16A1-214ENST00000488128 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
COL16A1-214ENST00000488128 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
COL16A1-214ENST00000488128 KIF25-AS1Q9Y6Z4 181 aa10.6□□□□□ -0.71
COL16A1-214ENST00000488128 U3KQE9 123 aa10.6□□□□□ -0.71
COL16A1-214ENST00000488128 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
COL16A1-214ENST00000488128 CENPVL3A0A0U1RRI6 287 aa10.59□□□□□ -0.71
COL16A1-214ENST00000488128 A8MZ25 164 aa10.59□□□□□ -0.71
COL16A1-214ENST00000488128 ZNF876PQ49A33 203 aa10.59□□□□□ -0.71
COL16A1-214ENST00000488128 FAM159AQ6UWV7 190 aa10.59□□□□□ -0.71
COL16A1-214ENST00000488128 TMEM263Q8WUH6 116 aaKnown RBP10.59□□□□□ -0.71
COL16A1-214ENST00000488128 VCYO14598 125 aa10.59□□□□□ -0.71
COL16A1-214ENST00000488128 CEMP1Q6PRD7 247 aaPredicted RBP10.59□□□□□ -0.71
COL16A1-214ENST00000488128 MINOS1Q5TGZ0 78 aa10.59□□□□□ -0.71
COL16A1-214ENST00000488128 BRD3OSQ6XYD6 125 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms