RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 DOCK11Q5JSL3 2073 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 VIRMAQ69YN4 1812 aaKnown RBP-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 TRAV12-2A0A075B6T6 113 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 TRAV12-3A0A0B4J271 114 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 A6NIN4 97 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 ZNF815PA8K554 130 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 FAM74A4Q5TZK3 123 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 SLC48A1Q6P1K1 146 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 Q6ZRX8 168 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 SPTSSBQ8NFR3 76 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 ATP6V0E2Q8NHE4 81 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 SMIM11BQ8TCY0 68 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 TMEM242Q9NWH2 141 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 V9GYV3 84 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 COL7A1Q02388 2944 aa-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 KIAA0100Q14667 2235 aaKnown RBP-0.07□□□□□ -2.42
R3HDM1-219ENST00000488035 TRAV2A0A0B4J234 112 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 C10orf142B7Z368 130 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 J3QLW9 94 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 NPFFO15130 113 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 CCL3L1P16619 93 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 RRAS2P62070 204 aaPredicted RBP-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 NCS1P62166 190 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 UBE2G1P62253 170 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 HAMPP81172 84 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 SSBP1Q04837 148 aaKnown RBP-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 SPCS2Q15005 226 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 MIC13Q5XKP0 118 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 ATP11AUNQ6ZP68 121 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 UBE2DNLQ8IWF7 75 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 C10orf82Q8WW14 230 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 SMIM3Q9BZL3 60 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 NDUFA12Q9UI09 145 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 PRO0255Q9UI72 69 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 SOGA1O94964 1423 aa-0.08□□□□□ -2.42
R3HDM1-219ENST00000488035 ERCC6Q03468 1493 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 PLXNA1Q9UIW2 1896 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 SSC5DA1L4H1 1573 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 AHCTF1Q8WYP5 2266 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 FXYD6-FXYD2A0A087WZ82 144 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 TRAV1-2A0A0B4J238 106 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 FAM236AA0A1B0GUQ0 79 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 FAM236BA0A1B0GV22 79 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 TMEM14DPA8MWL7 114 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 MCRIP1C9JLW8 97 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 K7ERU9 68 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 M0R3E3 92 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 SNCGO76070 127 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 PIRTP0C851 137 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 EDDM3BP56851 147 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 CCDC153Q494R4 210 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 LINC01545Q5VT33 79 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 Q96NJ1 140 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 PSMG3Q9BT73 122 aaPredicted RBP-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 RPRMQ9NS64 109 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 ERG28Q9UKR5 140 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 MYH13Q9UKX3 1938 aa-0.09□□□□□ -2.42
R3HDM1-219ENST00000488035 UHRF1BP1LA0JNW5 1464 aa-0.1□□□□□ -2.42
R3HDM1-219ENST00000488035 CDK5RAP2Q96SN8 1893 aa-0.1□□□□□ -2.42
R3HDM1-219ENST00000488035 CACNA1CQ13936 2221 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 ZNF142P52746 1687 aaPredicted RBP-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 AKAP11Q9UKA4 1901 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 HIVEP3Q5T1R4 2406 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 TRAV22A0A0B4J277 110 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 M0R2P5 195 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 IL5P05113 134 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 SMIM6P0DI80 62 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 HIST1H1AQ02539 215 aaPredicted RBP-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 SPAG11BQ08648 103 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 DEFB109BQ30KR1 87 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 CTAGE3PQ8IX95 158 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 AIF1LQ9BQI0 150 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 SCN3BQ9NY72 215 aa-0.1□□□□□ -2.43
R3HDM1-219ENST00000488035 UBR5O95071 2799 aaPredicted RBP-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 CELSR2Q9HCU4 2923 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 TRBV20-1A0A075B6N2 111 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 A0A0D9SFI3 127 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 J3QR89 54 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 M0R2Z0 102 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 IGLC6P0CF74 106 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 INSL4Q14641 139 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 MORN2Q502X0 79 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 SPANXN1Q5VSR9 72 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 CFAP126Q5VTH2 177 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 TSTD1Q8NFU3 115 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 LZICQ8WZA0 190 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 SEC11CQ9BY50 192 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 BATF3Q9NR55 127 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 UNC79Q9P2D8 2635 aa-0.11□□□□□ -2.43
R3HDM1-219ENST00000488035 CDK13Q14004 1512 aaKnown RBP-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 PHIPQ8WWQ0 1821 aa-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 G3V318 75 aa-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 CCDC179H3BU77 68 aa-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 APOC4-APOC2K7ER74 178 aa-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 YPEL1O60688 119 aa-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 DBIP07108 87 aaKnown RBP-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 LINC00694P0DN24 101 aa-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 CKS1BP61024 79 aa-0.12□□□□□ -2.43
R3HDM1-219ENST00000488035 C9orf116Q5BN46 136 aaPredicted RBP-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms