RNA–Protein interactions for RNA: ENST00000487943.5

IFT80-223, Transcript of intraflagellar transport 80, human

TSL 2

Gene IFT80, Length 3,893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT80-223	ENST00000487943	S100A4	P26447	101 aa	Known RBP	5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	SUMO4	Q6EEV6	95 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	SYT8	Q8NBV8	401 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	ZNRF2	Q8NHG8	242 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	TLN1	Q9Y490	2541 aa	Known RBP	5.02	□□□□□ -1.61
IFT80-223	ENST00000487943		A0A1W2PPR1	153 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	TCL1B	O95988	128 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	CKS1B	P61024	79 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	RNF152	Q8N8N0	203 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	KLHL30-AS1	Q8NEE0	82 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	RNASE4	P34096	147 aa	Known RBP	5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	SCGB1D4	Q6XE38	83 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943		Q6ZUT4	128 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	C9orf85	Q96MD7	179 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	ZNF580	Q9UK33	172 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943	NOTCH2	Q04721	2471 aa		5.02	□□□□□ -1.61
IFT80-223	ENST00000487943		A0A0B4J2C4	111 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	TRBV12-3	P01733	135 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	MGP	P08493	103 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943		P0DMU3	169 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	FAM231A	P0DMU4	169 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	FAM231C	P0DMU5	169 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	PSMB2	P49721	201 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	SCGB2A2	Q13296	93 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	RHOH	Q15669	191 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943		Q6ZS46	218 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	EDA2R	Q9HAV5	297 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	ZFHX3	Q15911	3703 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	EIF4EBP3	O60516	100 aa	Predicted RBP	5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	IGHG2	P01859	326 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	ATRX	P46100	2492 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	TMEM223	A0PJW6	202 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943		K7EMT4	169 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	LEPROT	O15243	131 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	IGLV1-40	P01703	118 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	CFHR3	Q02985	330 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	TMEM263	Q8WUH6	116 aa	Known RBP	5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	PRO1854	Q9UHT4	67 aa		5.01	□□□□□ -1.61
IFT80-223	ENST00000487943	SPRY2	O43597	315 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	XG	P55808	180 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	KIR2DL4	Q99706	377 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	MDFIC	Q9P1T7	246 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	MUC4	Q99102	2169 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943		J3QQQ9	107 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5	□□□□□ -1.61
IFT80-223	ENST00000487943	PTPRQ	Q9UMZ3	2332 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943		A8MWV9	139 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	MT-ATP8	P03928	68 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	ZNF688	P0C7X2	276 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	DCANP1	Q8TF63	244 aa		5	□□□□□ -1.61
IFT80-223	ENST00000487943	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5	□□□□□ -1.61
IFT80-223	ENST00000487943	IGHV3-16	A0A0C4DH30	117 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	SDHAF1	A6NFY7	115 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943		M0QY20	66 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	SPINK8	P0C7L1	97 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	RPL39	P62891	51 aa	Known RBP	4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	CITED1	Q99966	193 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	LOC107984156	A0A0G2JMH3	177 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943		A6NDX4	124 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	TMEM262	E9PQX1	116 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943		F6UB75	175 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	IGHV3-33	P01772	117 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	DEFB1	P60022	68 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	KLRB1	Q12918	225 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	ARL17A	Q8IVW1	177 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	SVIP	Q8NHG7	77 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	RHPN1-AS1	Q9BWJ2	59 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	SPTBN4	Q9H254	2564 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943		M0R2P5	195 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	TMEM219	Q86XT9	240 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	GEMIN7	Q9H840	131 aa	Known RBP	4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	DAZ1	Q9NQZ3	744 aa	Known RBP	4.99	□□□□□ -1.61
IFT80-223	ENST00000487943	ERG28	Q9UKR5	140 aa		4.99	□□□□□ -1.61
IFT80-223	ENST00000487943		J3KRW8	73 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	FAM159A	Q6UWV7	190 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	ANKRD29	Q8N6D5	301 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	PTH2	Q96A98	100 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	BPESC1	Q9GZL8	116 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	SVEP1	Q4LDE5	3571 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	ZNF22	P17026	224 aa	Predicted RBP	4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	SRD5A1	P18405	259 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	RPL13A	P40429	203 aa	Known RBP	4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	ID1	P41134	155 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	TRPT1	Q86TN4	253 aa	Known RBP	4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	C20orf203	Q8NBC4	194 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	FAM104A	Q969W3	186 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	RNF183	Q96D59	192 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	LITAF	Q99732	161 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	JPT2	Q9H910	190 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	PYGO1	Q9Y3Y4	419 aa		4.98	□□□□□ -1.61
IFT80-223	ENST00000487943	RHOD	O00212	210 aa		4.97	□□□□□ -1.61
IFT80-223	ENST00000487943	LGALS3	P17931	250 aa	Known RBP	4.97	□□□□□ -1.61
IFT80-223	ENST00000487943	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.97	□□□□□ -1.61
IFT80-223	ENST00000487943	TRBV30	A0A0K0K1B3	111 aa		4.97	□□□□□ -1.61
IFT80-223	ENST00000487943		A4D1N5	150 aa		4.97	□□□□□ -1.61
IFT80-223	ENST00000487943	SLC25A20	O43772	301 aa		4.97	□□□□□ -1.61
IFT80-223	ENST00000487943	TMEM170B	Q5T4T1	132 aa		4.97	□□□□□ -1.61
IFT80-223	ENST00000487943	TRAV26-1	A0A087WT03	109 aa		4.97	□□□□□ -1.61
IFT80-223	ENST00000487943	EMP1	P54849	157 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms