RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GGTLC3B5MD39 225 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 MYL12AP19105 171 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 FXYD4P59646 89 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 CNBPP62633 177 aaKnown RBP2.67□□□□□ -1.98
BRCA1-217ENST00000487825 RPL32P62910 135 aaKnown RBP2.67□□□□□ -1.98
BRCA1-217ENST00000487825 CACNG7P62955 275 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 DAZ4Q86SG3 579 aaKnown RBP2.67□□□□□ -1.98
BRCA1-217ENST00000487825 CBLN2Q8IUK8 224 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 Q8N9L7 120 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 TMEM80Q96HE8 168 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 C9orf85Q96MD7 179 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 MAP1LC3AQ9H492 121 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 DAZ3Q9NR90 486 aaKnown RBP2.67□□□□□ -1.98
BRCA1-217ENST00000487825 MRPL16Q9NX20 251 aaKnown RBP2.67□□□□□ -1.98
BRCA1-217ENST00000487825 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
BRCA1-217ENST00000487825 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
BRCA1-217ENST00000487825 TRAV12-3A0A0B4J271 114 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 TSTD3H0UI37 97 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 MED6O75586 246 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 PGLYRP1O75594 196 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-217ENST00000487825 EIF3GO75821 320 aaKnown RBP eCLIP2.66□□□□□ -1.98
BRCA1-217ENST00000487825 IGKV1-39P01597 117 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 IGKV1D-39P04432 117 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 UCHL1P09936 223 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 SFTA3P0C7M3 94 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 CHTF8P0CG12 524 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 GPX4P36969 197 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-217ENST00000487825 RPS25P62851 125 aaKnown RBP2.66□□□□□ -1.98
BRCA1-217ENST00000487825 ZNF726P1Q15940 193 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 TMEM97Q5BJF2 176 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 GATD1Q8NB37 220 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 ZNF555Q8NEP9 628 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 OR10G4Q8NGN3 311 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 Q8TAT8 98 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 STOML3Q8TAV4 291 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 DNAJC30Q96LL9 226 aa2.66□□□□□ -1.98
BRCA1-217ENST00000487825 A0A1B0GWB2 263 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 IRGMA1A4Y4 181 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ANKRD65E5RJM6 399 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ARPC5O15511 151 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 SERF1AO75920 110 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ATG12O94817 140 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 CT45A10P0DMU9 189 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 PTHLHP12272 177 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 CXCL3P19876 107 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 RPL12P30050 165 aaKnown RBP2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ZNF90Q03938 601 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 C4orf26Q17RF5 130 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ARRDC1Q8N5I2 433 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 EIF4E3Q8N5X7 224 aaKnown RBP2.65□□□□□ -1.99
BRCA1-217ENST00000487825 RNASE11Q8TAA1 199 aaKnown RBP2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ZFAND1Q8TCF1 268 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ZNF431Q8TF32 576 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-217ENST00000487825 SLC25A38Q96DW6 304 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 MRAP2Q96G30 205 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ACY3Q96HD9 319 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 GPR82Q96P67 336 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ODF3Q96PU9 254 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 SLC25A22Q9H936 323 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 ALG5Q9Y673 324 aa2.65□□□□□ -1.99
BRCA1-217ENST00000487825 IGKV1D-37A0A075B6S9 117 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 IGHV1OR15-1A0A075B7D0 117 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 FAM240AA0A1B0GVK7 77 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 PTTG1O95997 202 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 PFN1P07737 140 aaKnown RBP2.64□□□□□ -1.99
BRCA1-217ENST00000487825 AKR1C4P17516 323 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 CDNFQ49AH0 187 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 OR5H2Q8NGV7 314 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 ASB13Q8WXK3 278 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 RPUSD4Q96CM3 377 aaKnown RBP2.64□□□□□ -1.99
BRCA1-217ENST00000487825 C2orf50Q96LR7 162 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 PDCD10Q9BUL8 212 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 MIXL1Q9H2W2 232 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 ENY2Q9NPA8 101 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 BIN3Q9NQY0 253 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 TMEM56-RWDD3S4R434 201 aa2.64□□□□□ -1.99
BRCA1-217ENST00000487825 TRAV4A0A0B4J268 109 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 C7orf71A4D174 169 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 SNRPGP15A8MWD9 76 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 IFNA1P01562 189 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 IGKV1-5P01602 117 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 SEC11BP0C7V7 166 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 CRYGAP11844 174 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 GNG2P59768 71 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 FAM231DQ6ZW35 169 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 OR10P1Q8NGE3 313 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 SMIM12Q96EX1 92 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 DPH3Q96FX2 82 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 BTF3L4Q96K17 158 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 GTSF1LQ9H1H1 148 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 SPANXA1Q9NS26 97 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 KLK12Q9UKR0 248 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 LSM5Q9Y4Y9 91 aaKnown RBP2.63□□□□□ -1.99
BRCA1-217ENST00000487825 HSPB11Q9Y547 144 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 ORC6Q9Y5N6 252 aa2.63□□□□□ -1.99
BRCA1-217ENST00000487825 IGHV3-64A0A075B6Q5 118 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 TGIF2-C20orf24A0A0A6YYL0 155 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 MUC21A0A0G2JKD1 596 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 GPR31O00270 319 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms