RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GFRA4Q9GZZ7 299 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 RPP21Q9H633 154 aaKnown RBP7.92□□□□□ -1.14
TRIM56-204ENST00000487252 NAT8BQ9UHF3 227 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 SERTM2A0A1B0GWG4 89 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 A0A1B0GXF2 115 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 A0A1W2PS18 150 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 FAM231BA6NCW3 169 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 NUPR1O60356 82 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 ATP5G1P05496 136 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 TCL1AP56279 114 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 KIR3DS1Q14943 382 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 RRN3P1Q2M238 152 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 COX8CQ7Z4L0 72 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 ATP5L2Q7Z4Y8 100 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 NFE4Q86UQ8 179 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 TMEM256Q8N2U0 113 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 EXOC3-AS1Q8N2X6 119 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 OR4B1Q8NGF8 309 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 CMTM2Q8TAZ6 248 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 ZFP30Q9Y2G7 519 aa7.91□□□□□ -1.14
TRIM56-204ENST00000487252 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.14
TRIM56-204ENST00000487252 A8MWL6 223 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 DIRC3C9JPN6 131 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 GAS8-AS1O95177 125 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 CRISP2P16562 243 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 RPL7P18124 248 aaKnown RBP7.9□□□□□ -1.14
TRIM56-204ENST00000487252 SMCPP49901 116 aaPredicted RBP7.9□□□□□ -1.14
TRIM56-204ENST00000487252 PSG9Q00887 426 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 OR10J3Q5JRS4 329 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 GOLT1AQ6ZVE7 132 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 NUP35Q8NFH5 326 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 NTN5Q8WTR8 489 aaPredicted RBP7.9□□□□□ -1.14
TRIM56-204ENST00000487252 RPH3ALQ9UNE2 315 aa7.9□□□□□ -1.14
TRIM56-204ENST00000487252 A0A087X0K7 114 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 IGLV5-52A0A0A0MRZ9 124 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 CBY3A6NI87 242 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 LINC00587B1AMM8 73 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 DEFB130BP0DP73 79 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 DEFB130AP0DP74 79 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 GZMBP10144 247 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 FOXA3P55318 350 aaPredicted RBP7.89□□□□□ -1.15
TRIM56-204ENST00000487252 FXYD7P58549 80 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 CTAG1AP78358 180 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 PSG3Q16557 428 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 GDF5OSQ5U4N7 250 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 ZNF331Q9NQX6 463 aaPredicted RBP7.89□□□□□ -1.15
TRIM56-204ENST00000487252 PSG8Q9UQ74 426 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 GOLT1BQ9Y3E0 138 aa7.89□□□□□ -1.15
TRIM56-204ENST00000487252 TRAV8-1A0A0A6YYK1 113 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 PLAC8L1A1L4L8 177 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 GRIFINA4D1Z8 144 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 K7EQM0 130 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 P01737 135 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 APCSP02743 223 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 RAB4BP61018 213 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 MRPL54Q6P161 138 aaKnown RBP7.88□□□□□ -1.15
TRIM56-204ENST00000487252 PRNTQ86SH4 94 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 SGK494Q96LW2 274 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 U3KQE9 123 aa7.88□□□□□ -1.15
TRIM56-204ENST00000487252 HIGD1CA8MV81 97 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 SPINK4O60575 86 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 SERF1AO75920 110 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
TRIM56-204ENST00000487252 SNRPD3P62318 126 aaKnown RBP7.87□□□□□ -1.15
TRIM56-204ENST00000487252 C1orf194Q5T5A4 169 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 GATD1Q8NB37 220 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 GTSF1Q8WW33 167 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
TRIM56-204ENST00000487252 ZC2HC1AQ96GY0 325 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 AAMDCQ9H7C9 122 aa7.87□□□□□ -1.15
TRIM56-204ENST00000487252 SIVA1O15304 175 aa7.86□□□□□ -1.15
TRIM56-204ENST00000487252 TSPOP30536 169 aa7.86□□□□□ -1.15
TRIM56-204ENST00000487252 PKIAP61925 76 aa7.86□□□□□ -1.15
TRIM56-204ENST00000487252 LELP1Q5T871 98 aa7.86□□□□□ -1.15
TRIM56-204ENST00000487252 TRAV26-1A0A087WT03 109 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 F2Z2F3 143 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 H3BNG1 76 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 M0R3E3 92 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 BUB3O43684 328 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 SRIP30626 198 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 CSN1S1P47710 185 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 CRIP1P50238 77 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 HBBP68871 147 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 SLAQ13239 276 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 KIAA1644Q3SXP7 199 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 GLMPQ8WWB7 406 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 METTL26Q96S19 204 aa7.85□□□□□ -1.15
TRIM56-204ENST00000487252 ALKBH7Q9BT30 221 aaPredicted RBP7.85□□□□□ -1.15
TRIM56-204ENST00000487252 LRCOL1A6NCL2 159 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 PRM2P04554 102 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 GPX1P07203 203 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 SAPCD1Q5SSQ6 148 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 OR2D3Q8NGH3 330 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 C18orf32Q8TCD1 76 aa7.84□□□□□ -1.15
TRIM56-204ENST00000487252 MUC2Q02817 5179 aa7.83□□□□□ -1.16
TRIM56-204ENST00000487252 A0A1B0GW15 77 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms