RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 URGCP-MRPS24S4R325 110 aa12.67□□□□□ -0.38
SMPDL3A-202ENST00000487215 CTXND1A0A1B0GTU2 59 aa12.66□□□□□ -0.38
SMPDL3A-202ENST00000487215 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
SMPDL3A-202ENST00000487215 IGKV3D-20A0A0C4DH25 116 aa12.65□□□□□ -0.38
SMPDL3A-202ENST00000487215 SEC11BP0C7V7 166 aa12.65□□□□□ -0.38
SMPDL3A-202ENST00000487215 ASIPP42127 132 aa12.65□□□□□ -0.38
SMPDL3A-202ENST00000487215 RPL7L1Q6DKI1 246 aaKnown RBP12.65□□□□□ -0.38
SMPDL3A-202ENST00000487215 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
SMPDL3A-202ENST00000487215 UBE2WQ96B02 151 aa12.65□□□□□ -0.38
SMPDL3A-202ENST00000487215 FXYD6-FXYD2A0A087WZ82 144 aa12.64□□□□□ -0.39
SMPDL3A-202ENST00000487215 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
SMPDL3A-202ENST00000487215 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
SMPDL3A-202ENST00000487215 PEX7O00628 323 aa12.63□□□□□ -0.39
SMPDL3A-202ENST00000487215 RPL37AP61513 92 aaKnown RBP12.63□□□□□ -0.39
SMPDL3A-202ENST00000487215 Q5BKY6 102 aa12.63□□□□□ -0.39
SMPDL3A-202ENST00000487215 ATRAIDQ6UW56 229 aa12.63□□□□□ -0.39
SMPDL3A-202ENST00000487215 IL36BQ9NZH7 164 aa12.63□□□□□ -0.39
SMPDL3A-202ENST00000487215 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
SMPDL3A-202ENST00000487215 HNRNPA3P51991 378 aaKnown RBP12.62□□□□□ -0.39
SMPDL3A-202ENST00000487215 ZFP30Q9Y2G7 519 aa12.62□□□□□ -0.39
SMPDL3A-202ENST00000487215 A0A087WX48 190 aa12.61□□□□□ -0.39
SMPDL3A-202ENST00000487215 B4DEV8 164 aa12.61□□□□□ -0.39
SMPDL3A-202ENST00000487215 UBE2G2P60604 165 aa12.61□□□□□ -0.39
SMPDL3A-202ENST00000487215 ELOBQ15370 118 aa12.61□□□□□ -0.39
SMPDL3A-202ENST00000487215 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
SMPDL3A-202ENST00000487215 CHCHD7Q9BUK0 85 aa12.61□□□□□ -0.39
SMPDL3A-202ENST00000487215 FAM74A7A6NL05 159 aa12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 H3BVH4 76 aa12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 RHODO00212 210 aa12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 ZNF726P1Q15940 193 aa12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 DNLZQ5SXM8 178 aa12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 Q86TA4 180 aa12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 DAZAP1Q96EP5 407 aaKnown RBP12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 TCEAL7Q9BRU2 100 aa12.6□□□□□ -0.39
SMPDL3A-202ENST00000487215 C14orf177Q52M58 125 aa12.59□□□□□ -0.39
SMPDL3A-202ENST00000487215 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
SMPDL3A-202ENST00000487215 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
SMPDL3A-202ENST00000487215 FMC1Q96HJ9 113 aa12.59□□□□□ -0.39
SMPDL3A-202ENST00000487215 UBE2G1P62253 170 aa12.58□□□□□ -0.4
SMPDL3A-202ENST00000487215 FAM162BQ5T6X4 162 aa12.58□□□□□ -0.4
SMPDL3A-202ENST00000487215 KCNIP4Q6PIL6 250 aa12.58□□□□□ -0.4
SMPDL3A-202ENST00000487215 COX8CQ7Z4L0 72 aa12.58□□□□□ -0.4
SMPDL3A-202ENST00000487215 OR11H4Q8NGC9 324 aa12.58□□□□□ -0.4
SMPDL3A-202ENST00000487215 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
SMPDL3A-202ENST00000487215 KRBOX1C9JBD0 128 aa12.57□□□□□ -0.4
SMPDL3A-202ENST00000487215 FHITP49789 147 aa12.57□□□□□ -0.4
SMPDL3A-202ENST00000487215 Q0VG73 95 aa12.57□□□□□ -0.4
SMPDL3A-202ENST00000487215 C1orf43Q9BWL3 253 aa12.57□□□□□ -0.4
SMPDL3A-202ENST00000487215 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
SMPDL3A-202ENST00000487215 A0A087WWL8 130 aa12.56□□□□□ -0.4
SMPDL3A-202ENST00000487215 ARMS2P0C7Q2 107 aa12.56□□□□□ -0.4
SMPDL3A-202ENST00000487215 ZC2HC1AQ96GY0 325 aa12.56□□□□□ -0.4
SMPDL3A-202ENST00000487215 PHLDA3Q9Y5J5 127 aa12.56□□□□□ -0.4
SMPDL3A-202ENST00000487215 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
SMPDL3A-202ENST00000487215 TPT1P13693 172 aaKnown RBP12.55□□□□□ -0.4
SMPDL3A-202ENST00000487215 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
SMPDL3A-202ENST00000487215 SFRP2Q96HF1 295 aa12.55□□□□□ -0.4
SMPDL3A-202ENST00000487215 GRIFINA4D1Z8 144 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 M0R036 132 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 ARPC5O15511 151 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 SH2D1AO60880 128 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 MT1HL1P0DM35 61 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 CRIP1P50238 77 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 UBE2D3P61077 147 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 UBE2D2P62837 147 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 CST9LP1Q5W188 147 aa12.54□□□□□ -0.4
SMPDL3A-202ENST00000487215 TRBV10-1A0A0K0K1A3 114 aa12.53□□□□□ -0.4
SMPDL3A-202ENST00000487215 USP17L23D6RBM5 183 aa12.53□□□□□ -0.4
SMPDL3A-202ENST00000487215 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
SMPDL3A-202ENST00000487215 ZNF674Q2M3X9 581 aa12.53□□□□□ -0.4
SMPDL3A-202ENST00000487215 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
SMPDL3A-202ENST00000487215 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
SMPDL3A-202ENST00000487215 TMEM262E9PQX1 116 aa12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 LTAP01374 205 aa12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 CRPP02741 224 aa12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 S100A9P06702 114 aaKnown RBP12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 AKR1C3P42330 323 aa12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 RGS21Q2M5E4 152 aa12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 LINC01559Q495D7 138 aa12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 C15orf54Q8N8G6 183 aa12.52□□□□□ -0.41
SMPDL3A-202ENST00000487215 TRBV7-3A0A075B6L6 115 aa12.51□□□□□ -0.41
SMPDL3A-202ENST00000487215 M0R381 172 aa12.51□□□□□ -0.41
SMPDL3A-202ENST00000487215 HLA-DQA1P01909 254 aa12.51□□□□□ -0.41
SMPDL3A-202ENST00000487215 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
SMPDL3A-202ENST00000487215 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
SMPDL3A-202ENST00000487215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.51□□□□□ -0.41
SMPDL3A-202ENST00000487215 TRBV6-8A0A0A6YYG3 113 aa12.5□□□□□ -0.41
SMPDL3A-202ENST00000487215 PRSS1P07477 247 aa12.5□□□□□ -0.41
SMPDL3A-202ENST00000487215 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
SMPDL3A-202ENST00000487215 G3V3Q6 166 aa12.49□□□□□ -0.41
SMPDL3A-202ENST00000487215 PANO1I0J062 215 aa12.49□□□□□ -0.41
SMPDL3A-202ENST00000487215 ANGP03950 147 aaKnown RBP12.49□□□□□ -0.41
SMPDL3A-202ENST00000487215 C9orf163Q8N9P6 203 aa12.49□□□□□ -0.41
SMPDL3A-202ENST00000487215 OR10G8Q8NGN5 311 aa12.49□□□□□ -0.41
SMPDL3A-202ENST00000487215 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
SMPDL3A-202ENST00000487215 ZNF345Q14585 488 aa12.48□□□□□ -0.41
SMPDL3A-202ENST00000487215 DGAT2L7PQ6IED9 249 aa12.48□□□□□ -0.41
SMPDL3A-202ENST00000487215 PAGE4O60829 102 aa12.47□□□□□ -0.41
SMPDL3A-202ENST00000487215 PFDN1O60925 122 aa12.47□□□□□ -0.41
SMPDL3A-202ENST00000487215 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms