RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
HDAC6-229ENST00000486665 PIK3CD-AS1Q5SR53 167 aa9.03□□□□□ -0.96
HDAC6-229ENST00000486665 CFAP126Q5VTH2 177 aa9.03□□□□□ -0.96
HDAC6-229ENST00000486665 Q6ZTC4 211 aa9.03□□□□□ -0.96
HDAC6-229ENST00000486665 TEX48A0A1B0GUV7 120 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 CRYGDP07320 174 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 RIGQ13278 110 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
HDAC6-229ENST00000486665 OR4C5Q8NGB2 326 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 ZNF479Q96JC4 524 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 C18orf15Q96N68 181 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 NDUFAF3Q9BU61 184 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 URGCP-MRPS24S4R325 110 aa9.02□□□□□ -0.97
HDAC6-229ENST00000486665 A0A087WWL8 130 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 IGHV3-73A0A0B4J1V6 119 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 TRAV4A0A0B4J268 109 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 A8MWV9 139 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 S100A1P23297 94 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 UFSP1Q6NVU6 142 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-229ENST00000486665 BORCS7Q96B45 105 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 KRTAP17-1Q9BYP8 105 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 KIF25-AS1Q9Y6Z4 181 aa9.01□□□□□ -0.97
HDAC6-229ENST00000486665 KMT2AQ03164 3969 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 A0A1B0GXF2 115 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 SCO1O75880 301 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 HTN3P15516 51 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 HOXA5P20719 270 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 EVI2AP22794 236 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 LINC00315P59091 139 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 FHL2Q14192 279 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 TMEM88Q6PEY1 159 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 KCNIP4Q6PIL6 250 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 Q6ZSN1 163 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 CBLN2Q8IUK8 224 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 BTF3L4Q96K17 158 aa9□□□□□ -0.97
HDAC6-229ENST00000486665 ATP5G1P05496 136 aa8.99□□□□□ -0.97
HDAC6-229ENST00000486665 S100PP25815 95 aa8.99□□□□□ -0.97
HDAC6-229ENST00000486665 CAMPP49913 170 aa8.99□□□□□ -0.97
HDAC6-229ENST00000486665 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
HDAC6-229ENST00000486665 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
HDAC6-229ENST00000486665 F5H768 121 aa8.98□□□□□ -0.97
HDAC6-229ENST00000486665 TRGC1P0CF51 173 aa8.98□□□□□ -0.97
HDAC6-229ENST00000486665 ELOBQ15370 118 aa8.98□□□□□ -0.97
HDAC6-229ENST00000486665 FAM74A4Q5TZK3 123 aa8.98□□□□□ -0.97
HDAC6-229ENST00000486665 AP1S3Q96PC3 154 aa8.98□□□□□ -0.97
HDAC6-229ENST00000486665 SMCO4Q9NRQ5 59 aa8.98□□□□□ -0.97
HDAC6-229ENST00000486665 TRAV9-1A0A075B6T8 112 aa8.97□□□□□ -0.97
HDAC6-229ENST00000486665 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
HDAC6-229ENST00000486665 HBBP68871 147 aa8.97□□□□□ -0.97
HDAC6-229ENST00000486665 ZFP2Q6ZN57 461 aa8.97□□□□□ -0.97
HDAC6-229ENST00000486665 ATP5L2Q7Z4Y8 100 aa8.97□□□□□ -0.97
HDAC6-229ENST00000486665 PHLDA1Q8WV24 401 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-229ENST00000486665 TMEM191AQ9H0A3 160 aa8.97□□□□□ -0.97
HDAC6-229ENST00000486665 DNAH10Q8IVF4 4471 aa8.96□□□□□ -0.97
HDAC6-229ENST00000486665 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
HDAC6-229ENST00000486665 TRGV4A0A0C4DH28 118 aa8.96□□□□□ -0.98
HDAC6-229ENST00000486665 A0A1B0GW15 77 aa8.96□□□□□ -0.98
HDAC6-229ENST00000486665 SMIM17P0DL12 118 aa8.96□□□□□ -0.98
HDAC6-229ENST00000486665 GATA1P15976 413 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-229ENST00000486665 GATD1Q8NB37 220 aa8.96□□□□□ -0.98
HDAC6-229ENST00000486665 RNF185Q96GF1 192 aa8.96□□□□□ -0.98
HDAC6-229ENST00000486665 DPH3P1Q9H4G8 78 aa8.96□□□□□ -0.98
HDAC6-229ENST00000486665 RHODO00212 210 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 CIDEAO60543 219 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 MGPP08493 103 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 SMIM15Q7Z3B0 74 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 AMN1Q8IY45 258 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 Q9UF83 564 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 HHLA3Q9XRX5 114 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 NACAE9PAV3 2078 aa8.95□□□□□ -0.98
HDAC6-229ENST00000486665 TRBV24-1A0A075B6N3 115 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 A0A0J9YY99 117 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 F5H697 171 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 S100A8P05109 93 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 RAB4AP20338 218 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 CRYBA4P53673 196 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 RAB4BP61018 213 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 ZNF56Q15929 161 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 SUMO4Q6EEV6 95 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 TMEM136Q6ZRR5 245 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 SLC25A29Q8N8R3 303 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
HDAC6-229ENST00000486665 TRAV26-1A0A087WT03 109 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 LOC100131303A0A0U1RQF7 123 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 GAS8-AS1O95177 125 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 P0DMU3 169 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 FAM231AP0DMU4 169 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 FAM231CP0DMU5 169 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
HDAC6-229ENST00000486665 CEMP1Q6PRD7 247 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-229ENST00000486665 FAM210BQ96KR6 192 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
HDAC6-229ENST00000486665 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 TRAV26-2A0A0B4J265 109 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 TRBV6-4A0A1B0GX49 114 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 COLCA2A8K830 154 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 M0QY20 66 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 PAX4O43316 350 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms