RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 C20orf203Q8NBC4 194 aa9.12□□□□□ -0.95
U2AF1-211ENST00000486519 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
U2AF1-211ENST00000486519 OTORQ9NRC9 128 aa9.12□□□□□ -0.95
U2AF1-211ENST00000486519 RHODO00212 210 aa9.11□□□□□ -0.95
U2AF1-211ENST00000486519 KRTAP1-4P0C5Y4 121 aa9.11□□□□□ -0.95
U2AF1-211ENST00000486519 SRSF3P84103 164 aaKnown RBP9.11□□□□□ -0.95
U2AF1-211ENST00000486519 OR10G8Q8NGN5 311 aa9.11□□□□□ -0.95
U2AF1-211ENST00000486519 CMTM2Q8TAZ6 248 aa9.11□□□□□ -0.95
U2AF1-211ENST00000486519 TRBV10-1A0A0K0K1A3 114 aa9.1□□□□□ -0.95
U2AF1-211ENST00000486519 FAUP35544 74 aaKnown RBP9.1□□□□□ -0.95
U2AF1-211ENST00000486519 SPCS2Q15005 226 aa9.1□□□□□ -0.95
U2AF1-211ENST00000486519 TMEM252Q8N6L7 170 aa9.1□□□□□ -0.95
U2AF1-211ENST00000486519 IGLV4-60A0A075B6I1 120 aa9.09□□□□□ -0.95
U2AF1-211ENST00000486519 A0A087WXM4 84 aa9.09□□□□□ -0.95
U2AF1-211ENST00000486519 S100A4P26447 101 aaKnown RBP9.09□□□□□ -0.95
U2AF1-211ENST00000486519 S100A11P31949 105 aa9.09□□□□□ -0.95
U2AF1-211ENST00000486519 SULT1A1P50225 295 aa9.09□□□□□ -0.95
U2AF1-211ENST00000486519 SFRP2Q96HF1 295 aa9.09□□□□□ -0.95
U2AF1-211ENST00000486519 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
U2AF1-211ENST00000486519 RSL24D1Q9UHA3 163 aaKnown RBP9.09□□□□□ -0.95
U2AF1-211ENST00000486519 TSPAN13O95857 204 aa9.08□□□□□ -0.96
U2AF1-211ENST00000486519 SUN5Q8TC36 379 aa9.08□□□□□ -0.96
U2AF1-211ENST00000486519 VCX3AQ9NNX9 186 aa9.08□□□□□ -0.96
U2AF1-211ENST00000486519 IL36BQ9NZH7 164 aa9.08□□□□□ -0.96
U2AF1-211ENST00000486519 MBD2Q9UBB5 411 aa9.08□□□□□ -0.96
U2AF1-211ENST00000486519 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
U2AF1-211ENST00000486519 TOMM5Q8N4H5 51 aa9.07□□□□□ -0.96
U2AF1-211ENST00000486519 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
U2AF1-211ENST00000486519 C1orf137Q5JT78 98 aa9.06□□□□□ -0.96
U2AF1-211ENST00000486519 LINC00526Q96FQ7 95 aa9.06□□□□□ -0.96
U2AF1-211ENST00000486519 NDFIP1Q9BT67 221 aa9.06□□□□□ -0.96
U2AF1-211ENST00000486519 LYRM2Q9NU23 88 aaPredicted RBP9.06□□□□□ -0.96
U2AF1-211ENST00000486519 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
U2AF1-211ENST00000486519 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
U2AF1-211ENST00000486519 GAGE12HA6NDE8 117 aa9.05□□□□□ -0.96
U2AF1-211ENST00000486519 SMUG1Q53HV7 270 aa9.05□□□□□ -0.96
U2AF1-211ENST00000486519 MITD1Q8WV92 249 aa9.05□□□□□ -0.96
U2AF1-211ENST00000486519 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 TRAV8-4A0A0B4J246 113 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.04□□□□□ -0.96
U2AF1-211ENST00000486519 M0R381 172 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 P01737 135 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 MT-ND6P03923 174 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 PKIAP61925 76 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 NHLH2Q02577 135 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 PRR27Q6MZM9 219 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 PRNTQ86SH4 94 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 KRTAP11-1Q8IUC1 163 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 OR11H4Q8NGC9 324 aa9.04□□□□□ -0.96
U2AF1-211ENST00000486519 H0Y9J4 135 aa9.03□□□□□ -0.96
U2AF1-211ENST00000486519 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
U2AF1-211ENST00000486519 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
U2AF1-211ENST00000486519 DIRC1Q969H9 104 aa9.03□□□□□ -0.96
U2AF1-211ENST00000486519 DERL1Q9BUN8 251 aa9.03□□□□□ -0.96
U2AF1-211ENST00000486519 FAM25EA8MYX2 175 aa9.02□□□□□ -0.97
U2AF1-211ENST00000486519 NDUFB6O95139 128 aa9.02□□□□□ -0.97
U2AF1-211ENST00000486519 TCRAP04437 139 aa9.02□□□□□ -0.97
U2AF1-211ENST00000486519 HBG1P69891 147 aa9.02□□□□□ -0.97
U2AF1-211ENST00000486519 HBG2P69892 147 aa9.02□□□□□ -0.97
U2AF1-211ENST00000486519 ATP6V1FQ16864 119 aa9.02□□□□□ -0.97
U2AF1-211ENST00000486519 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
U2AF1-211ENST00000486519 TRBV6-1A0A0K0K1D8 114 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 M0R036 132 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 GZMBP10144 247 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
U2AF1-211ENST00000486519 AP3S2P59780 193 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 FAM74A1Q5RGS3 127 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
U2AF1-211ENST00000486519 STX12Q86Y82 276 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 WDR61Q9GZS3 305 aaKnown RBP9.01□□□□□ -0.97
U2AF1-211ENST00000486519 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
U2AF1-211ENST00000486519 TRBV25-1A0A075B6N4 114 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 B4DEV8 164 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 CYCSP99999 105 aaKnown RBP9□□□□□ -0.97
U2AF1-211ENST00000486519 FLI1Q01543 452 aaPredicted RBP9□□□□□ -0.97
U2AF1-211ENST00000486519 RAB32Q13637 225 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 IQCJQ1A5X6 159 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 PYDC2Q56P42 97 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 ARL6IP6Q8N6S5 226 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 OR5C1Q8NGR4 320 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 KRTAP4-1Q9BYQ7 146 aa9□□□□□ -0.97
U2AF1-211ENST00000486519 KRBOX1C9JBD0 128 aa8.99□□□□□ -0.97
U2AF1-211ENST00000486519 HMGB3O15347 200 aaKnown RBP8.99□□□□□ -0.97
U2AF1-211ENST00000486519 AMTP48728 403 aa8.99□□□□□ -0.97
U2AF1-211ENST00000486519 CRIP1P50238 77 aa8.99□□□□□ -0.97
U2AF1-211ENST00000486519 ZNF56Q15929 161 aa8.99□□□□□ -0.97
U2AF1-211ENST00000486519 DNLZQ5SXM8 178 aa8.99□□□□□ -0.97
U2AF1-211ENST00000486519 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
U2AF1-211ENST00000486519 V9GYH0 126 aa8.99□□□□□ -0.97
U2AF1-211ENST00000486519 TRAV34A0A0B4J273 112 aa8.98□□□□□ -0.97
U2AF1-211ENST00000486519 PTTG1IPP53801 180 aa8.98□□□□□ -0.97
U2AF1-211ENST00000486519 RAB4BP61018 213 aa8.98□□□□□ -0.97
U2AF1-211ENST00000486519 ZFP69Q49AA0 526 aa8.98□□□□□ -0.97
U2AF1-211ENST00000486519 CFAP161Q6P656 301 aa8.98□□□□□ -0.97
U2AF1-211ENST00000486519 PHLDA3Q9Y5J5 127 aa8.98□□□□□ -0.97
U2AF1-211ENST00000486519 IGKV3OR2-268A0A0C4DH90 116 aa8.97□□□□□ -0.97
U2AF1-211ENST00000486519 UBE2D1P51668 147 aa8.97□□□□□ -0.97
U2AF1-211ENST00000486519 RAB2AP61019 212 aa8.97□□□□□ -0.97
U2AF1-211ENST00000486519 IL15RAQ13261 267 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms