RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SLC51BQ86UW2 128 aa12.4□□□□□ -0.42
PRPF40A-209ENST00000486100 BAGE2Q86Y30 109 aa12.4□□□□□ -0.42
PRPF40A-209ENST00000486100 SFRP2Q96HF1 295 aa12.4□□□□□ -0.42
PRPF40A-209ENST00000486100 MLST8Q9BVC4 326 aa12.4□□□□□ -0.42
PRPF40A-209ENST00000486100 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
PRPF40A-209ENST00000486100 C14orf178Q8N769 122 aaPredicted RBP12.39□□□□□ -0.43
PRPF40A-209ENST00000486100 Q9UF83 564 aa12.39□□□□□ -0.43
PRPF40A-209ENST00000486100 APOBP04114 4563 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-209ENST00000486100 ABCA13Q86UQ4 5058 aa12.39□□□□□ -0.43
PRPF40A-209ENST00000486100 TRAV1-1A0A0B4J248 108 aa12.38□□□□□ -0.43
PRPF40A-209ENST00000486100 M0R381 172 aa12.38□□□□□ -0.43
PRPF40A-209ENST00000486100 RAB5CP51148 216 aa12.38□□□□□ -0.43
PRPF40A-209ENST00000486100 CCL20P78556 96 aa12.38□□□□□ -0.43
PRPF40A-209ENST00000486100 EIF5AL1Q6IS14 154 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-209ENST00000486100 CDPF1Q6NVV7 123 aa12.38□□□□□ -0.43
PRPF40A-209ENST00000486100 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
PRPF40A-209ENST00000486100 A0A087WWL8 130 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 FAM74A4Q5TZK3 123 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 MAPKAPK5-AS1Q8N8E1 139 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 KRTAP4-5Q9BYR2 181 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 MANBALQ9NQG1 85 aa12.37□□□□□ -0.43
PRPF40A-209ENST00000486100 CXCL1P09341 107 aa12.36□□□□□ -0.43
PRPF40A-209ENST00000486100 NKX2-5P52952 324 aaPredicted RBP12.36□□□□□ -0.43
PRPF40A-209ENST00000486100 GNG13Q9P2W3 67 aa12.36□□□□□ -0.43
PRPF40A-209ENST00000486100 A0A087WWC5 75 aa12.35□□□□□ -0.43
PRPF40A-209ENST00000486100 FUSP35637 526 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF40A-209ENST00000486100 RPL19P84098 196 aaKnown RBP12.35□□□□□ -0.43
PRPF40A-209ENST00000486100 TEX46H3BTG2 121 aa12.34□□□□□ -0.43
PRPF40A-209ENST00000486100 PSCAO43653 123 aa12.34□□□□□ -0.43
PRPF40A-209ENST00000486100 RPL35P42766 123 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-209ENST00000486100 SULT1A2P50226 295 aa12.34□□□□□ -0.43
PRPF40A-209ENST00000486100 C11orf52Q96A22 123 aa12.34□□□□□ -0.43
PRPF40A-209ENST00000486100 PRR27Q6MZM9 219 aa12.33□□□□□ -0.44
PRPF40A-209ENST00000486100 SSBP4Q9BWG4 385 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-209ENST00000486100 Q9HAA7 133 aa12.33□□□□□ -0.44
PRPF40A-209ENST00000486100 TRBV10-1A0A0K0K1A3 114 aa12.32□□□□□ -0.44
PRPF40A-209ENST00000486100 LRCOL1A6NCL2 159 aa12.32□□□□□ -0.44
PRPF40A-209ENST00000486100 SNAI2O43623 268 aa12.32□□□□□ -0.44
PRPF40A-209ENST00000486100 LAGE3Q14657 143 aa12.32□□□□□ -0.44
PRPF40A-209ENST00000486100 Q8N1X5 172 aa12.32□□□□□ -0.44
PRPF40A-209ENST00000486100 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
PRPF40A-209ENST00000486100 OR10AG1Q8NH19 301 aa12.31□□□□□ -0.44
PRPF40A-209ENST00000486100 DERL1Q9BUN8 251 aa12.31□□□□□ -0.44
PRPF40A-209ENST00000486100 RAB4BP61018 213 aa12.3□□□□□ -0.44
PRPF40A-209ENST00000486100 RPL36AP83881 106 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-209ENST00000486100 Q8N3U1 123 aa12.3□□□□□ -0.44
PRPF40A-209ENST00000486100 RPL36ALQ969Q0 106 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-209ENST00000486100 SPANXN1Q5VSR9 72 aa12.29□□□□□ -0.44
PRPF40A-209ENST00000486100 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
PRPF40A-209ENST00000486100 TRBV7-3A0A075B6L6 115 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 TRAV8-3A0A0A6YYJ7 113 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 PDE6DO43924 150 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 IGLV2-8P01709 118 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 UBE2D3P61077 147 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 UBE2D2P62837 147 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 MEF2BQ02080 365 aaPredicted RBP12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 CENPWQ5EE01 88 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 TOR2AQ5JU69 321 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 OR10G8Q8NGN5 311 aa12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
PRPF40A-209ENST00000486100 MUC21A0A0G2JKD1 596 aa12.27□□□□□ -0.45
PRPF40A-209ENST00000486100 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.45
PRPF40A-209ENST00000486100 RAB19A4D1S5 217 aa12.27□□□□□ -0.45
PRPF40A-209ENST00000486100 IFNA1P01562 189 aa12.27□□□□□ -0.45
PRPF40A-209ENST00000486100 GCSHP23434 173 aa12.27□□□□□ -0.45
PRPF40A-209ENST00000486100 NIT1Q86X76 327 aa12.27□□□□□ -0.45
PRPF40A-209ENST00000486100 DAZAP1Q96EP5 407 aaKnown RBP12.27□□□□□ -0.45
PRPF40A-209ENST00000486100 XGP55808 180 aa12.26□□□□□ -0.45
PRPF40A-209ENST00000486100 ZNF56Q15929 161 aa12.26□□□□□ -0.45
PRPF40A-209ENST00000486100 Q8N814 137 aa12.26□□□□□ -0.45
PRPF40A-209ENST00000486100 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
PRPF40A-209ENST00000486100 SMIM12Q96EX1 92 aa12.26□□□□□ -0.45
PRPF40A-209ENST00000486100 MED9Q9NWA0 146 aa12.26□□□□□ -0.45
PRPF40A-209ENST00000486100 URGCP-MRPS24S4R325 110 aa12.26□□□□□ -0.45
PRPF40A-209ENST00000486100 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
PRPF40A-209ENST00000486100 BCL2P10415 239 aa12.25□□□□□ -0.45
PRPF40A-209ENST00000486100 GNG4P50150 75 aa12.25□□□□□ -0.45
PRPF40A-209ENST00000486100 RPS20P60866 119 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-209ENST00000486100 SSTP61278 116 aa12.25□□□□□ -0.45
PRPF40A-209ENST00000486100 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
PRPF40A-209ENST00000486100 IGLV5-52A0A0A0MRZ9 124 aa12.24□□□□□ -0.45
PRPF40A-209ENST00000486100 TEX261Q6UWH6 196 aa12.24□□□□□ -0.45
PRPF40A-209ENST00000486100 OR2D3Q8NGH3 330 aa12.24□□□□□ -0.45
PRPF40A-209ENST00000486100 CHCHD7Q9BUK0 85 aa12.24□□□□□ -0.45
PRPF40A-209ENST00000486100 VAX2Q9UIW0 290 aa12.24□□□□□ -0.45
PRPF40A-209ENST00000486100 KIF25-AS1Q9Y6Z4 181 aa12.24□□□□□ -0.45
PRPF40A-209ENST00000486100 F5H697 171 aa12.23□□□□□ -0.45
PRPF40A-209ENST00000486100 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
PRPF40A-209ENST00000486100 SMIM17P0DL12 118 aa12.23□□□□□ -0.45
PRPF40A-209ENST00000486100 TAGLN2P37802 199 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-209ENST00000486100 BIN3Q9NQY0 253 aa12.23□□□□□ -0.45
PRPF40A-209ENST00000486100 COX11Q9Y6N1 276 aa12.23□□□□□ -0.45
PRPF40A-209ENST00000486100 TRBV20OR9-2A0A075B6H5 130 aa12.22□□□□□ -0.45
PRPF40A-209ENST00000486100 A0A087WX48 190 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms