RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 CRYGDP07320 174 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 GAGE1Q13065 139 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 GAGE4Q13068 117 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 GAGE5Q13069 117 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 GAGE13Q4V321 117 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 PRR27Q6MZM9 219 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 ZFP82Q8N141 532 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 GTSF1LQ9H1H1 148 aa13.22□□□□□ -0.29
SNX5-213ENST00000486039 A0A087WWL8 130 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 IGHV3-38A0A0C4DH36 116 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 RHODO00212 210 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 CXCL1P09341 107 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 KRTAP10-2P60368 255 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 LELP1Q5T871 98 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 FAM74A4Q5TZK3 123 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 MSRB1Q9NZV6 116 aa13.21□□□□□ -0.29
SNX5-213ENST00000486039 TRAV8-6A0A0B4J262 113 aa13.2□□□□□ -0.3
SNX5-213ENST00000486039 IGLV2-8P01709 118 aa13.2□□□□□ -0.3
SNX5-213ENST00000486039 LINC01556Q5JQF7 62 aa13.2□□□□□ -0.3
SNX5-213ENST00000486039 NFE4Q86UQ8 179 aa13.2□□□□□ -0.3
SNX5-213ENST00000486039 MEF2BQ02080 365 aaPredicted RBP13.19□□□□□ -0.3
SNX5-213ENST00000486039 CENPWQ5EE01 88 aa13.19□□□□□ -0.3
SNX5-213ENST00000486039 C10orf126Q8N4M7 172 aa13.19□□□□□ -0.3
SNX5-213ENST00000486039 OR10AG1Q8NH19 301 aa13.19□□□□□ -0.3
SNX5-213ENST00000486039 SSBP4Q9BWG4 385 aaPredicted RBP13.19□□□□□ -0.3
SNX5-213ENST00000486039 RAB19A4D1S5 217 aa13.18□□□□□ -0.3
SNX5-213ENST00000486039 SNAI2O43623 268 aa13.18□□□□□ -0.3
SNX5-213ENST00000486039 BCL2P10415 239 aa13.18□□□□□ -0.3
SNX5-213ENST00000486039 PDE6DO43924 150 aa13.17□□□□□ -0.3
SNX5-213ENST00000486039 IFNA1P01562 189 aa13.17□□□□□ -0.3
SNX5-213ENST00000486039 MUC21A0A0G2JKD1 596 aa13.16□□□□□ -0.3
SNX5-213ENST00000486039 MUC21A0A140T8X8 626 aa13.16□□□□□ -0.3
SNX5-213ENST00000486039 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
SNX5-213ENST00000486039 MED9Q9NWA0 146 aa13.16□□□□□ -0.3
SNX5-213ENST00000486039 IBA57-AS1B1ANH7 110 aa13.15□□□□□ -0.3
SNX5-213ENST00000486039 IGHV3-30P01768 117 aa13.15□□□□□ -0.3
SNX5-213ENST00000486039 IGHV3-33P01772 117 aa13.15□□□□□ -0.3
SNX5-213ENST00000486039 IGHV3-30-3P0DP02 117 aa13.15□□□□□ -0.3
SNX5-213ENST00000486039 IGHV3-30-5P0DP03 117 aa13.15□□□□□ -0.3
SNX5-213ENST00000486039 MAPKAPK5-AS1Q8N8E1 139 aa13.15□□□□□ -0.3
SNX5-213ENST00000486039 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
SNX5-213ENST00000486039 TRBV20OR9-2A0A075B6H5 130 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 C19orf71A6NCJ1 209 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 GNG4P50150 75 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 ERVFC1-1P60608 527 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 ALKAL2Q6UX46 152 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 Q8N3U1 123 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
SNX5-213ENST00000486039 A0A087WTM6 91 aa13.13□□□□□ -0.31
SNX5-213ENST00000486039 SPANXN1Q5VSR9 72 aa13.13□□□□□ -0.31
SNX5-213ENST00000486039 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
SNX5-213ENST00000486039 GZMBP10144 247 aa13.12□□□□□ -0.31
SNX5-213ENST00000486039 SSTP61278 116 aa13.12□□□□□ -0.31
SNX5-213ENST00000486039 DAZAP1Q96EP5 407 aaKnown RBP13.12□□□□□ -0.31
SNX5-213ENST00000486039 IGLC6P0CF74 106 aa13.11□□□□□ -0.31
SNX5-213ENST00000486039 FUSP35637 526 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNX5-213ENST00000486039 TAGLN2P37802 199 aaKnown RBP13.11□□□□□ -0.31
SNX5-213ENST00000486039 NKX2-5P52952 324 aaPredicted RBP13.11□□□□□ -0.31
SNX5-213ENST00000486039 RAB4BP61018 213 aa13.11□□□□□ -0.31
SNX5-213ENST00000486039 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
SNX5-213ENST00000486039 A0A087WWC5 75 aa13.1□□□□□ -0.31
SNX5-213ENST00000486039 EREGO14944 169 aa13.1□□□□□ -0.31
SNX5-213ENST00000486039 ZNF56Q15929 161 aa13.1□□□□□ -0.31
SNX5-213ENST00000486039 TRBV7-3A0A075B6L6 115 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 RBFOX3A6NFN3 312 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 UBE2D3P61077 147 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 UBE2D2P62837 147 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 RPL36AP83881 106 aaKnown RBP13.09□□□□□ -0.31
SNX5-213ENST00000486039 Q8N1X5 172 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 OR10G8Q8NGN5 311 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 LYPD6BQ8NI32 183 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 RPL36ALQ969Q0 106 aaKnown RBP13.09□□□□□ -0.31
SNX5-213ENST00000486039 Q9HAA7 133 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 KIF25-AS1Q9Y6Z4 181 aa13.09□□□□□ -0.31
SNX5-213ENST00000486039 P01737 135 aa13.08□□□□□ -0.32
SNX5-213ENST00000486039 RPS20P60866 119 aaKnown RBP13.08□□□□□ -0.32
SNX5-213ENST00000486039 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
SNX5-213ENST00000486039 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
SNX5-213ENST00000486039 TPPP3Q9BW30 176 aa13.08□□□□□ -0.32
SNX5-213ENST00000486039 DAZ4Q86SG3 579 aaKnown RBP13.07□□□□□ -0.32
SNX5-213ENST00000486039 BIN3Q9NQY0 253 aa13.07□□□□□ -0.32
SNX5-213ENST00000486039 DAZ3Q9NR90 486 aaKnown RBP13.07□□□□□ -0.32
SNX5-213ENST00000486039 LRCOL1A6NCL2 159 aa13.06□□□□□ -0.32
SNX5-213ENST00000486039 LAGE3Q14657 143 aa13.06□□□□□ -0.32
SNX5-213ENST00000486039 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
SNX5-213ENST00000486039 NUDT11Q96G61 164 aa13.06□□□□□ -0.32
SNX5-213ENST00000486039 AP1S3Q96PC3 154 aa13.06□□□□□ -0.32
SNX5-213ENST00000486039 F5H697 171 aa13.05□□□□□ -0.32
SNX5-213ENST00000486039 K7EN84 100 aa13.05□□□□□ -0.32
SNX5-213ENST00000486039 PSCAO43653 123 aa13.05□□□□□ -0.32
SNX5-213ENST00000486039 CDPF1Q6NVV7 123 aa13.05□□□□□ -0.32
SNX5-213ENST00000486039 NIT1Q86X76 327 aa13.05□□□□□ -0.32
SNX5-213ENST00000486039 OCC1Q8TAD7 63 aa13.05□□□□□ -0.32
SNX5-213ENST00000486039 XKRY2A2RUG3 117 aa13.04□□□□□ -0.32
SNX5-213ENST00000486039 SMIM17P0DL12 118 aa13.04□□□□□ -0.32
SNX5-213ENST00000486039 CACNG7P62955 275 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms