RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 MANBALQ9NQG1 85 aa11.95□□□□□ -0.5
COL6A1-204ENST00000486023 C1QBP02746 253 aa11.94□□□□□ -0.5
COL6A1-204ENST00000486023 TIRAPP58753 221 aa11.94□□□□□ -0.5
COL6A1-204ENST00000486023 PIK3CD-AS1Q5SR53 167 aa11.94□□□□□ -0.5
COL6A1-204ENST00000486023 LELP1Q5T871 98 aa11.94□□□□□ -0.5
COL6A1-204ENST00000486023 ZFP82Q8N141 532 aa11.94□□□□□ -0.5
COL6A1-204ENST00000486023 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
COL6A1-204ENST00000486023 Q9HAA7 133 aa11.94□□□□□ -0.5
COL6A1-204ENST00000486023 SULT1A2P50226 295 aa11.93□□□□□ -0.5
COL6A1-204ENST00000486023 SLC51BQ86UW2 128 aa11.93□□□□□ -0.5
COL6A1-204ENST00000486023 C10orf126Q8N4M7 172 aa11.93□□□□□ -0.5
COL6A1-204ENST00000486023 SCRT2Q9NQ03 307 aa11.93□□□□□ -0.5
COL6A1-204ENST00000486023 RHODO00212 210 aa11.92□□□□□ -0.5
COL6A1-204ENST00000486023 PSCAO43653 123 aa11.92□□□□□ -0.5
COL6A1-204ENST00000486023 UFSP1Q6NVU6 142 aa11.92□□□□□ -0.5
COL6A1-204ENST00000486023 AKAP14Q86UN6 197 aa11.92□□□□□ -0.5
COL6A1-204ENST00000486023 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
COL6A1-204ENST00000486023 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
COL6A1-204ENST00000486023 RAB19A4D1S5 217 aa11.91□□□□□ -0.5
COL6A1-204ENST00000486023 K7EP13 123 aa11.91□□□□□ -0.5
COL6A1-204ENST00000486023 LINC01556Q5JQF7 62 aa11.91□□□□□ -0.5
COL6A1-204ENST00000486023 KRTAP17-1Q9BYP8 105 aa11.91□□□□□ -0.5
COL6A1-204ENST00000486023 A0A087WTM6 91 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 IFNA1P01562 189 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 CENPWQ5EE01 88 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 SPANXN1Q5VSR9 72 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 Q8N3U1 123 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 OR10AG1Q8NH19 301 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
COL6A1-204ENST00000486023 TPPP3Q9BW30 176 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 MED9Q9NWA0 146 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 RYR1P21817 5038 aa11.9□□□□□ -0.5
COL6A1-204ENST00000486023 HSPG2P98160 4391 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 IBA57-AS1B1ANH7 110 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 F5H697 171 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 GZMBP10144 247 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 GNG4P50150 75 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 ZNF56Q15929 161 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 PGPEP1Q9NXJ5 209 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
COL6A1-204ENST00000486023 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-204ENST00000486023 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
COL6A1-204ENST00000486023 PCLOQ9Y6V0 5065 aa11.86□□□□□ -0.51
COL6A1-204ENST00000486023 PDE6DO43924 150 aa11.86□□□□□ -0.51
COL6A1-204ENST00000486023 LINC00694P0DN24 101 aa11.86□□□□□ -0.51
COL6A1-204ENST00000486023 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
COL6A1-204ENST00000486023 C9orf62Q8N4C0 152 aa11.86□□□□□ -0.51
COL6A1-204ENST00000486023 MAPKAPK5-AS1Q8N8E1 139 aa11.86□□□□□ -0.51
COL6A1-204ENST00000486023 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
COL6A1-204ENST00000486023 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
COL6A1-204ENST00000486023 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
COL6A1-204ENST00000486023 RBFOX3A6NFN3 312 aa11.85□□□□□ -0.51
COL6A1-204ENST00000486023 CDK2AP2O75956 126 aa11.85□□□□□ -0.51
COL6A1-204ENST00000486023 IGLV2-8P01709 118 aa11.85□□□□□ -0.51
COL6A1-204ENST00000486023 BCL2P10415 239 aa11.85□□□□□ -0.51
COL6A1-204ENST00000486023 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
COL6A1-204ENST00000486023 DAZ4Q86SG3 579 aaKnown RBP11.85□□□□□ -0.51
COL6A1-204ENST00000486023 DAZ3Q9NR90 486 aaKnown RBP11.85□□□□□ -0.51
COL6A1-204ENST00000486023 VAX2Q9UIW0 290 aa11.85□□□□□ -0.51
COL6A1-204ENST00000486023 URGCP-MRPS24S4R325 110 aa11.85□□□□□ -0.51
COL6A1-204ENST00000486023 APOBP04114 4563 aaKnown RBP11.85□□□□□ -0.51
COL6A1-204ENST00000486023 A0A087WWC5 75 aa11.84□□□□□ -0.51
COL6A1-204ENST00000486023 SNAI2O43623 268 aa11.84□□□□□ -0.51
COL6A1-204ENST00000486023 CXCL1P09341 107 aa11.84□□□□□ -0.51
COL6A1-204ENST00000486023 SMIM17P0DL12 118 aa11.84□□□□□ -0.51
COL6A1-204ENST00000486023 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
COL6A1-204ENST00000486023 RAB4BP61018 213 aa11.83□□□□□ -0.52
COL6A1-204ENST00000486023 SSBP4Q9BWG4 385 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-204ENST00000486023 TRBV7-3A0A075B6L6 115 aa11.82□□□□□ -0.52
COL6A1-204ENST00000486023 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
COL6A1-204ENST00000486023 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
COL6A1-204ENST00000486023 P01737 135 aa11.82□□□□□ -0.52
COL6A1-204ENST00000486023 FER1L6-AS1Q8NA97 138 aa11.82□□□□□ -0.52
COL6A1-204ENST00000486023 KRTAP4-5Q9BYR2 181 aa11.82□□□□□ -0.52
COL6A1-204ENST00000486023 MGPP08493 103 aa11.81□□□□□ -0.52
COL6A1-204ENST00000486023 NKX2-5P52952 324 aaPredicted RBP11.81□□□□□ -0.52
COL6A1-204ENST00000486023 RPS20P60866 119 aaKnown RBP11.81□□□□□ -0.52
COL6A1-204ENST00000486023 UBE2D3P61077 147 aa11.81□□□□□ -0.52
COL6A1-204ENST00000486023 UBE2D2P62837 147 aa11.81□□□□□ -0.52
COL6A1-204ENST00000486023 KCNIP4Q6PIL6 250 aa11.81□□□□□ -0.52
COL6A1-204ENST00000486023 TRBV20OR9-2A0A075B6H5 130 aa11.8□□□□□ -0.52
COL6A1-204ENST00000486023 A0A087WX48 190 aa11.8□□□□□ -0.52
COL6A1-204ENST00000486023 CEBPGP53567 150 aa11.8□□□□□ -0.52
COL6A1-204ENST00000486023 NEXN-AS1Q8NBZ9 246 aa11.8□□□□□ -0.52
COL6A1-204ENST00000486023 AP1S3Q96PC3 154 aa11.8□□□□□ -0.52
COL6A1-204ENST00000486023 TM2D2Q9BX73 214 aa11.8□□□□□ -0.52
COL6A1-204ENST00000486023 A0A1B0GVG6 124 aa11.79□□□□□ -0.52
COL6A1-204ENST00000486023 XKRY2A2RUG3 117 aa11.79□□□□□ -0.52
COL6A1-204ENST00000486023 C19orf71A6NCJ1 209 aa11.79□□□□□ -0.52
COL6A1-204ENST00000486023 BLOC1S1P78537 153 aa11.79□□□□□ -0.52
COL6A1-204ENST00000486023 CDPF1Q6NVV7 123 aa11.79□□□□□ -0.52
COL6A1-204ENST00000486023 NIT1Q86X76 327 aa11.79□□□□□ -0.52
COL6A1-204ENST00000486023 KLK12Q9UKR0 248 aa11.79□□□□□ -0.52
COL6A1-204ENST00000486023 IGLV5-52A0A0A0MRZ9 124 aa11.78□□□□□ -0.52
COL6A1-204ENST00000486023 TRAV8-3A0A0A6YYJ7 113 aa11.78□□□□□ -0.52
COL6A1-204ENST00000486023 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
COL6A1-204ENST00000486023 LECT2O14960 151 aa11.78□□□□□ -0.52
COL6A1-204ENST00000486023 TAGLN2P37802 199 aaKnown RBP11.78□□□□□ -0.52
COL6A1-204ENST00000486023 KRTAP10-1P60331 282 aa11.78□□□□□ -0.52
COL6A1-204ENST00000486023 TOR2AQ5JU69 321 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms