RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 KCNRGQ8N5I3 272 aa5.09□□□□□ -1.59
CPNE1-226ENST00000486021 FRZBQ92765 325 aa5.09□□□□□ -1.59
CPNE1-226ENST00000486021 RPL36ALQ969Q0 106 aaKnown RBP5.09□□□□□ -1.59
CPNE1-226ENST00000486021 DAZAP1Q96EP5 407 aaKnown RBP5.09□□□□□ -1.59
CPNE1-226ENST00000486021 CHCHD7Q9BUK0 85 aa5.09□□□□□ -1.59
CPNE1-226ENST00000486021 ZNF471Q9BX82 626 aaPredicted RBP5.09□□□□□ -1.59
CPNE1-226ENST00000486021 MANBALQ9NQG1 85 aa5.09□□□□□ -1.59
CPNE1-226ENST00000486021 BIRC6Q9NR09 4857 aa5.09□□□□□ -1.6
CPNE1-226ENST00000486021 A0A087WTM6 91 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 TRAV34A0A0B4J273 112 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 RAB19A4D1S5 217 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 EIF3GO75821 320 aaKnown RBP eCLIP5.08□□□□□ -1.6
CPNE1-226ENST00000486021 IFNA1P01562 189 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 CXCL1P09341 107 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 H2AFB1P0C5Y9 115 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 ARMS2P0C7Q2 107 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 GCSHP23434 173 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 ZNF80P51504 273 aaPredicted RBP5.08□□□□□ -1.6
CPNE1-226ENST00000486021 Q0VG73 95 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 LINC01559Q495D7 138 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 Q8N1X5 172 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 SFT2D1Q8WV19 159 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 KRTAP1-5Q9BYS1 174 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 PARLQ9H300 379 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 VPS13DQ5THJ4 4388 aa5.08□□□□□ -1.6
CPNE1-226ENST00000486021 A0A087WX48 190 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 IGLV5-52A0A0A0MRZ9 124 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 IGHV3-73A0A0B4J1V6 119 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 EPM2AB3EWF7 344 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 FAM229AH3BQW9 127 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 SMLR1H3BR10 107 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 H3BVH4 76 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 BCL2L11O43521 198 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 PAGE4O60829 102 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 LTAP01374 205 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 TAGLN2P37802 199 aaKnown RBP5.07□□□□□ -1.6
CPNE1-226ENST00000486021 RPS20P60866 119 aaKnown RBP5.07□□□□□ -1.6
CPNE1-226ENST00000486021 ZNF674Q2M3X9 581 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 FAM74A4Q5TZK3 123 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 SPANXN1Q5VSR9 72 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 Q6ZRN7 208 aaPredicted RBP5.07□□□□□ -1.6
CPNE1-226ENST00000486021 BAGE2Q86Y30 109 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 FAM213BQ8TBF2 198 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 MBD3L1Q8WWY6 194 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 SMIM12Q96EX1 92 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 SFRP2Q96HF1 295 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 SCRT2Q9NQ03 307 aa5.07□□□□□ -1.6
CPNE1-226ENST00000486021 TRBV7-3A0A075B6L6 115 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 IGKV3D-20A0A0C4DH25 116 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 LOC100131303A0A0U1RQF7 123 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 GAGE12JA6NER3 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 H7C1H1 209 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 M0R036 132 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 M0R381 172 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 SH2D1AO60880 128 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 IGHV3-30P01768 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 IGHV3-33P01772 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 IGHV3-30-3P0DP02 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 IGHV3-30-5P0DP03 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 GAGE1Q13065 139 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 GAGE4Q13068 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 GAGE5Q13069 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 ZNF726P1Q15940 193 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 GAGE13Q4V321 117 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 C14orf177Q52M58 125 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 LINC00479Q96M42 142 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 Q9HAA7 133 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 NIT2Q9NQR4 276 aa5.06□□□□□ -1.6
CPNE1-226ENST00000486021 PDE6DO43924 150 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 CRPP02741 224 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 S100A2P29034 98 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 ZNF56Q15929 161 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 DMRTA1Q5VZB9 504 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 TMUB2Q71RG4 321 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 C15orf54Q8N8G6 183 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 Q8N976 141 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 ZC2HC1AQ96GY0 325 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 TMEM70Q9BUB7 260 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 SMCO4Q9NRQ5 59 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 CYTL1Q9NRR1 136 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 C11orf21Q9P2W6 132 aa5.05□□□□□ -1.6
CPNE1-226ENST00000486021 TMEM218A2RU14 115 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 RBFOX3A6NFN3 312 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 TMEM262E9PQX1 116 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 F2Z2F3 143 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 F5H697 171 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 TSTD3H0UI37 97 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 OR5AL1P0C617 328 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 KRTAP10-2P60368 255 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 CACNG7P62955 275 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 BLOC1S1P78537 153 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 PEA15Q15121 130 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 DAZ4Q86SG3 579 aaKnown RBP5.04□□□□□ -1.6
CPNE1-226ENST00000486021 Q8N814 137 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 AP1S3Q96PC3 154 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 DAZ3Q9NR90 486 aaKnown RBP5.04□□□□□ -1.6
CPNE1-226ENST00000486021 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
CPNE1-226ENST00000486021 TMSB15BA0A087X1C1 80 aa5.03□□□□□ -1.6
CPNE1-226ENST00000486021 GRIFINA4D1Z8 144 aa5.03□□□□□ -1.6
CPNE1-226ENST00000486021 TRGC1P0CF51 173 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms