RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 F5P12259 2224 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 TRAV12-3A0A0B4J271 114 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 COX4I1P13073 169 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 SPCS2Q15005 226 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 MIC13Q5XKP0 118 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 VSTM2AQ8TAG5 236 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 SMIM11BQ8TCY0 68 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 COX7B2Q8TF08 81 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 SMIM3Q9BZL3 60 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 SAR1AQ9NR31 198 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 BATF3Q9NR55 127 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 GSKIPQ9P0R6 139 aa0.05□□□□□ -2.4
GCFC2-209ENST00000486016 ABCA12Q86UK0 2595 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 LAMC3Q9Y6N6 1575 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 PIEZO1Q92508 2521 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 SPINK1P00995 79 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 TSPAN19P0C672 248 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 Q5BKY6 102 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 SLC48A1Q6P1K1 146 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 Q96NJ1 140 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 DISP2A7MBM2 1401 aa0.04□□□□□ -2.4
GCFC2-209ENST00000486016 PTPRZ1P23471 2315 aaPredicted RBP0.03□□□□□ -2.4
GCFC2-209ENST00000486016 SSC5DA1L4H1 1573 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 ZFYVE26Q68DK2 2539 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 TRBV7-1A0A0A6YYK4 115 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 PITX3O75364 302 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 APODP05090 189 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 NMBP08949 121 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 PIRTP0C851 137 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 LINC00694P0DN24 101 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 COX6A2Q02221 97 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 FAM74A4Q5TZK3 123 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 CTAGE3PQ8IX95 158 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 LZICQ8WZA0 190 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 TMEM242Q9NWH2 141 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 V9GYV3 84 aa0.03□□□□□ -2.4
GCFC2-209ENST00000486016 CDK5RAP2Q96SN8 1893 aa0.03□□□□□ -2.41
GCFC2-209ENST00000486016 PLXNA1Q9UIW2 1896 aa0.03□□□□□ -2.41
GCFC2-209ENST00000486016 UNC13BO14795 1591 aa0.02□□□□□ -2.41
GCFC2-209ENST00000486016 MYO7AQ13402 2215 aa0.02□□□□□ -2.41
GCFC2-209ENST00000486016 J3QR89 54 aa0.02□□□□□ -2.41
GCFC2-209ENST00000486016 M0R2Z0 102 aa0.02□□□□□ -2.41
GCFC2-209ENST00000486016 SPANXN1Q5VSR9 72 aa0.02□□□□□ -2.41
GCFC2-209ENST00000486016 PRG4Q92954 1404 aaPredicted RBP0.02□□□□□ -2.41
GCFC2-209ENST00000486016 MYH13Q9UKX3 1938 aa0.01□□□□□ -2.41
GCFC2-209ENST00000486016 NCR2O95944 276 aa0.01□□□□□ -2.41
GCFC2-209ENST00000486016 ACYP2P14621 99 aa0.01□□□□□ -2.41
GCFC2-209ENST00000486016 C9orf116Q5BN46 136 aaPredicted RBP0.01□□□□□ -2.41
GCFC2-209ENST00000486016 Q6ZUT4 128 aa0.01□□□□□ -2.41
GCFC2-209ENST00000486016 C10orf82Q8WW14 230 aa0.01□□□□□ -2.41
GCFC2-209ENST00000486016 PHIPQ8WWQ0 1821 aa0.01□□□□□ -2.41
GCFC2-209ENST00000486016 IGF2RP11717 2491 aa0.01□□□□□ -2.41
GCFC2-209ENST00000486016 MUC22E2RYF6 1773 aaPredicted RBP0□□□□□ -2.41
GCFC2-209ENST00000486016 K7ERU9 68 aa0□□□□□ -2.41
GCFC2-209ENST00000486016 ADGRB1O14514 1584 aa0□□□□□ -2.41
GCFC2-209ENST00000486016 KIAA0100Q14667 2235 aaKnown RBP0□□□□□ -2.41
GCFC2-209ENST00000486016 TSTD1Q8NFU3 115 aa0□□□□□ -2.41
GCFC2-209ENST00000486016 NRXN2Q9P2S2 1712 aa0□□□□□ -2.41
GCFC2-209ENST00000486016 CADP27708 2225 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 UNC13AQ9UPW8 1703 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 FHAD1B1AJZ9 1412 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 POLQO75417 2590 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 TRGV1A0A0A0MS02 117 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 LOC105371267A0A1B0GV96 52 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 TMEM14DPA8MWL7 114 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 NPFFO15130 113 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 EDDM3BP56851 147 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 UBE2G1P62253 170 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 ALX1Q15699 326 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 RPL7L1Q6DKI1 246 aaKnown RBP-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 Q6ZRX8 168 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 FAM213BQ8TBF2 198 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 MAFIPQ8WZ33 124 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 PSMG3Q9BT73 122 aaPredicted RBP-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 RPRMQ9NS64 109 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 COPZ2Q9P299 210 aa-0.01□□□□□ -2.41
GCFC2-209ENST00000486016 NCOR2Q9Y618 2525 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 LRP1Q07954 4544 aaKnown RBP-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 IBTKQ9P2D0 1353 aaPredicted RBP-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 TMEM2Q9UHN6 1383 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 AKAP11Q9UKA4 1901 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 CLPSL1A2RUU4 121 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 IL5P05113 134 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 GCHFRP30047 84 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 UBE2D1P51668 147 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 RRAS2P62070 204 aaPredicted RBP-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 INSL4Q14641 139 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 SMIM21Q3B7S5 101 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 ANP32BQ92688 251 aaKnown RBP-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 F8P00451 2351 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 LAMB1P07942 1786 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 OTOGQ6ZRI0 2925 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 CEP152O94986 1710 aa-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 HRNRQ86YZ3 2850 aaPredicted RBP-0.02□□□□□ -2.41
GCFC2-209ENST00000486016 A6NIN4 97 aa-0.03□□□□□ -2.41
GCFC2-209ENST00000486016 SCIMPQ6UWF3 145 aa-0.03□□□□□ -2.41
GCFC2-209ENST00000486016 SCP2D1Q9UJQ7 156 aa-0.03□□□□□ -2.41
GCFC2-209ENST00000486016 DOCK11Q5JSL3 2073 aa-0.03□□□□□ -2.41
GCFC2-209ENST00000486016 MYH6P13533 1939 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms