RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
PTCD1-205ENST00000485746 GTSF1LQ9H1H1 148 aa8.56□□□□□ -1.04
PTCD1-205ENST00000485746 NACAE9PAV3 2078 aa8.56□□□□□ -1.04
PTCD1-205ENST00000485746 SMIM17P0DL12 118 aa8.55□□□□□ -1.04
PTCD1-205ENST00000485746 BTF3P20290 206 aaKnown RBP8.55□□□□□ -1.04
PTCD1-205ENST00000485746 TIRAPP58753 221 aa8.55□□□□□ -1.04
PTCD1-205ENST00000485746 TNP2Q05952 138 aa8.55□□□□□ -1.04
PTCD1-205ENST00000485746 ZNF56Q15929 161 aa8.55□□□□□ -1.04
PTCD1-205ENST00000485746 ZNF575Q86XF7 245 aa8.55□□□□□ -1.04
PTCD1-205ENST00000485746 C14orf178Q8N769 122 aaPredicted RBP8.55□□□□□ -1.04
PTCD1-205ENST00000485746 OR10AG1Q8NH19 301 aa8.55□□□□□ -1.04
PTCD1-205ENST00000485746 KRTAP1-5Q9BYS1 174 aa8.55□□□□□ -1.04
PTCD1-205ENST00000485746 A0A1B0GVY2 172 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 F5H697 171 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 SNAI2O43623 268 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 IGLV2-8P01709 118 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 CRYGDP07320 174 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 OR5AL1P0C617 328 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 GZMBP10144 247 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 LINC00315P59091 139 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 LELP1Q5T871 98 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 UFSP1Q6NVU6 142 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 FER1L6-AS1Q8NA97 138 aa8.54□□□□□ -1.04
PTCD1-205ENST00000485746 IGHV3-38A0A0C4DH36 116 aa8.53□□□□□ -1.04
PTCD1-205ENST00000485746 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
PTCD1-205ENST00000485746 TOR2AQ5JU69 321 aa8.53□□□□□ -1.04
PTCD1-205ENST00000485746 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
PTCD1-205ENST00000485746 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
PTCD1-205ENST00000485746 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
PTCD1-205ENST00000485746 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
PTCD1-205ENST00000485746 EPPK1P58107 5090 aaKnown RBP8.53□□□□□ -1.04
PTCD1-205ENST00000485746 C19orf71A6NCJ1 209 aa8.52□□□□□ -1.05
PTCD1-205ENST00000485746 TMEM250H0YL14 139 aa8.52□□□□□ -1.05
PTCD1-205ENST00000485746 K7EP13 123 aa8.52□□□□□ -1.05
PTCD1-205ENST00000485746 DNAH10OSP0CZ25 163 aa8.52□□□□□ -1.05
PTCD1-205ENST00000485746 RAB4BP61018 213 aa8.52□□□□□ -1.05
PTCD1-205ENST00000485746 TRBV20OR9-2A0A075B6H5 130 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 A0A087WWC5 75 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 EREGO14944 169 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 IGHV3-30P01768 117 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 IGHV3-33P01772 117 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 IGHV3-30-3P0DP02 117 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 IGHV3-30-5P0DP03 117 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 CACNG7P62955 275 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.51□□□□□ -1.05
PTCD1-205ENST00000485746 NUDT10Q8NFP7 164 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 LYPD6BQ8NI32 183 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 OCC1Q8TAD7 63 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 TNFRSF18Q9Y5U5 241 aa8.51□□□□□ -1.05
PTCD1-205ENST00000485746 TRBV10-1A0A0K0K1A3 114 aa8.5□□□□□ -1.05
PTCD1-205ENST00000485746 F2Z2F3 143 aa8.5□□□□□ -1.05
PTCD1-205ENST00000485746 MGPP08493 103 aa8.5□□□□□ -1.05
PTCD1-205ENST00000485746 KCNIP4Q6PIL6 250 aa8.5□□□□□ -1.05
PTCD1-205ENST00000485746 RPP21Q9H633 154 aaKnown RBP8.5□□□□□ -1.05
PTCD1-205ENST00000485746 Q9UF83 564 aa8.5□□□□□ -1.05
PTCD1-205ENST00000485746 BIRC6Q9NR09 4857 aa8.49□□□□□ -1.05
PTCD1-205ENST00000485746 GATCO43716 136 aaKnown RBP8.49□□□□□ -1.05
PTCD1-205ENST00000485746 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
PTCD1-205ENST00000485746 LYZL1Q6UWQ5 148 aa8.49□□□□□ -1.05
PTCD1-205ENST00000485746 FAM210AQ96ND0 272 aa8.49□□□□□ -1.05
PTCD1-205ENST00000485746 SMIM7Q9BQ49 75 aa8.49□□□□□ -1.05
PTCD1-205ENST00000485746 RNASE7Q9H1E1 156 aaKnown RBP8.49□□□□□ -1.05
PTCD1-205ENST00000485746 URGCP-MRPS24S4R325 110 aa8.49□□□□□ -1.05
PTCD1-205ENST00000485746 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
PTCD1-205ENST00000485746 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
PTCD1-205ENST00000485746 K7EN84 100 aa8.48□□□□□ -1.05
PTCD1-205ENST00000485746 PSCAO43653 123 aa8.48□□□□□ -1.05
PTCD1-205ENST00000485746 TRGC1P0CF51 173 aa8.48□□□□□ -1.05
PTCD1-205ENST00000485746 IGLC6P0CF74 106 aa8.48□□□□□ -1.05
PTCD1-205ENST00000485746 ERVFC1-1P60608 527 aa8.48□□□□□ -1.05
PTCD1-205ENST00000485746 ZNF727A8MUV8 499 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 LINC00694P0DN24 101 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 NTF3P20783 257 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 TWIST1Q15672 202 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 TEX261Q6UWH6 196 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 SMIM15Q7Z3B0 74 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 SPATA12Q7Z6I5 190 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 NEXN-AS1Q8NBZ9 246 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 Q9HAA7 133 aa8.47□□□□□ -1.05
PTCD1-205ENST00000485746 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.05
PTCD1-205ENST00000485746 A8MWL6 223 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 TMEM262E9PQX1 116 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 H7C1H1 209 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
PTCD1-205ENST00000485746 UBE2D3P61077 147 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 UBE2D2P62837 147 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 DNAH2Q9P225 4427 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 DNAH17Q9UFH2 4485 aa8.46□□□□□ -1.06
PTCD1-205ENST00000485746 A0A087WX48 190 aa8.45□□□□□ -1.06
PTCD1-205ENST00000485746 SRP19P09132 144 aaKnown RBP8.45□□□□□ -1.06
PTCD1-205ENST00000485746 PEA15Q15121 130 aa8.45□□□□□ -1.06
PTCD1-205ENST00000485746 WDR73Q6P4I2 378 aa8.45□□□□□ -1.06
PTCD1-205ENST00000485746 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
PTCD1-205ENST00000485746 OR10G8Q8NGN5 311 aa8.45□□□□□ -1.06
PTCD1-205ENST00000485746 BORCS7Q96B45 105 aa8.45□□□□□ -1.06
PTCD1-205ENST00000485746 FAM231DQ6ZW35 169 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms