RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 PTH2Q96A98 100 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 ODF3Q96PU9 254 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 PLXNB1O43157 2135 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 ZDBF2Q9HCK1 2354 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV3-35A0A0C4DH35 117 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 FAM240AA0A1B0GVK7 77 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 H3BUA1 57 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 SLC25A20O43772 301 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 MGPP08493 103 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 LGALS3P17931 250 aaKnown RBP3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 S100A4P26447 101 aaKnown RBP3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 RNASE4P34096 147 aaKnown RBP3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 GAGE5Q13069 117 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 GAGE6Q13070 117 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 ATXN8Q156A1 80 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 BEAN1Q3B7T3 259 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 SUMO4Q6EEV6 95 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 DEFB123Q8N688 67 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 TEX29Q8N6K0 151 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 C5orf56Q8N8D9 126 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 KLHL30-AS1Q8NEE0 82 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 ZNRF2Q8NHG8 242 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 RNF183Q96D59 192 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 KIR2DL4Q99706 377 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 ANAPC13Q9BS18 74 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 EDA2RQ9HAV5 297 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 SPANXA1Q9NS26 97 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 MDFICQ9P1T7 246 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 NBEAQ8NFP9 2946 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
SMARCC1-206ENST00000485737 ARFGEF3Q5TH69 2177 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV3OR16-13A0A075B7E8 117 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV3-74A0A0B4J1X5 117 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 TRAV41A0A0B4J266 112 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 TRBV30A0A0K0K1B3 111 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 TRBV10-2A0A0K0K1G8 114 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 A4D1N5 150 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 LINC01548A6NM66 108 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 G3V318 75 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 H3BT86 120 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 M0R2P5 195 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 IGF1P05019 195 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 NHLRC4P0CG21 123 aaPredicted RBP3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 SCGB1C2P0DMR2 95 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 ZNF22P17026 224 aaPredicted RBP3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 SAA4P35542 130 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 ARL3P36405 182 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 LINC01620Q4KN68 170 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 PRR30Q53SZ7 412 aaPredicted RBP3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 Q6YL49 198 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 LINC01560Q8TB33 94 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 C9orf85Q96MD7 179 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 MOB4Q9Y3A3 225 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 SPENQ96T58 3664 aaKnown RBP3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 CUL9Q8IWT3 2517 aa3.48□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV3-49A0A0A0MS15 119 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 C9JAW5 83 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 NPFFO15130 113 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 SNCGO76070 127 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 LY6HO94772 140 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 GATA3P23771 443 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 NDUFV3P56181 108 aaKnown RBP3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 RPL39P62891 51 aaKnown RBP3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 GAGE2BQ13066 116 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 GAGE2EQ4V326 116 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 DEFB121Q5J5C9 76 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 TMEM170BQ5T4T1 132 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 SFTA2Q6UW10 78 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 TRPT1Q86TN4 253 aaKnown RBP3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 RNF152Q8N8N0 203 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 USMG5Q96IX5 58 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 LITAFQ99732 161 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 SPANXDQ9BXN6 97 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 SPANXCQ9NY87 97 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 GAGE2DQ9UEU5 116 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 ZNF580Q9UK33 172 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 ZNF256Q9Y2P7 627 aaPredicted RBP3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 ZGRF1Q86YA3 2104 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 TRIOBPQ9H2D6 2365 aa3.47□□□□□ -1.85
SMARCC1-206ENST00000485737 DMDP11532 3685 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 IGLV4-3A0A075B6K6 122 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 TRAV8-4A0A0B4J246 113 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 IGHV3-16A0A0C4DH30 117 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 TRBV7-7A0A0K0K1E9 115 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 H3BMM0 161 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 K7EMT4 169 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 M0QY20 66 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 GNRH2O43555 120 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 EMP1P54849 157 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 FAM159AQ6UWV7 190 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 UNQ9165/PRO28630Q6UXU0 137 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 C20orf203Q8NBC4 194 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 NTN5Q8WTR8 489 aaPredicted RBP3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 UBE2WQ96B02 151 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 VPS13AQ96RL7 3174 aa3.46□□□□□ -1.86
SMARCC1-206ENST00000485737 TRAV2A0A0B4J234 112 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms