RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TVP23CQ96ET8 276 aa4.21□□□□□ -1.74
PTCD3-215ENST00000484203 C9orf85Q96MD7 179 aa4.21□□□□□ -1.74
PTCD3-215ENST00000484203 MAP1LC3BQ9GZQ8 125 aa4.21□□□□□ -1.74
PTCD3-215ENST00000484203 MUC4Q99102 2169 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 A0A087WWC5 75 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 IGHV3-38A0A0C4DH36 116 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 KANTRA0A1W2PQU2 76 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 FAM74A7A6NL05 159 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 B4DEV8 164 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 TEX46H3BTG2 121 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 PRYO14603 147 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 RS1O15537 224 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 PFDN1O60925 122 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 TNFRSF6BO95407 300 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 RAB5CP51148 216 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 LINC00315P59091 139 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 DNLZQ5SXM8 178 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 FAM162BQ5T6X4 162 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 CFAP126Q5VTH2 177 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 Q6ZQT7 251 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 SPATA12Q7Z6I5 190 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 KCNRGQ8N5I3 272 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 FAM210AQ96ND0 272 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 TM2D2Q9BX73 214 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 IL36BQ9NZH7 164 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 MSRB1Q9NZV6 116 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 TNFRSF18Q9Y5U5 241 aa4.2□□□□□ -1.74
PTCD3-215ENST00000484203 EIF3GO75821 320 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTCD3-215ENST00000484203 CRYGDP07320 174 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 UBE2G2P60604 165 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 LAGE3Q14657 143 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 LINC01556Q5JQF7 62 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 ZNF506Q5JVG8 444 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 LELP1Q5T871 98 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 CST9LP1Q5W188 147 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 Q86TA4 180 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 SLC25A29Q8N8R3 303 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-215ENST00000484203 OR11H4Q8NGC9 324 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 ATP6V0E2Q8NHE4 81 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 SFT2D1Q8WV19 159 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 MBD3L1Q8WWY6 194 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 SGK494Q96LW2 274 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 KRTAP1-5Q9BYS1 174 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 GTSF1LQ9H1H1 148 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 PCLOQ9Y6V0 5065 aa4.19□□□□□ -1.74
PTCD3-215ENST00000484203 PKD1P98161 4303 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 IGKV3D-20A0A0C4DH25 116 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 TRBV10-1A0A0K0K1A3 114 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 A0A1B0GVG6 124 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 BCL2L11O43521 198 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 PSCAO43653 123 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 LTAP01374 205 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 CXCL1P09341 107 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 RNASE3P12724 160 aaKnown RBP4.18□□□□□ -1.74
PTCD3-215ENST00000484203 TPT1P13693 172 aaKnown RBP4.18□□□□□ -1.74
PTCD3-215ENST00000484203 AKR1C3P42330 323 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 ZNF80P51504 273 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-215ENST00000484203 ZNF726P1Q15940 193 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 OR10J3Q5JRS4 329 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 Q6ZRN7 208 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-215ENST00000484203 ZFP82Q8N141 532 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 ZNF471Q9BX82 626 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-215ENST00000484203 CYTL1Q9NRR1 136 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 PHLDA3Q9Y5J5 127 aa4.18□□□□□ -1.74
PTCD3-215ENST00000484203 RYR1P21817 5038 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 TRAV8-3A0A0A6YYJ7 113 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 TRAV34A0A0B4J273 112 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 PGPEP1LA6NFU8 196 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 IBA57-AS1B1ANH7 110 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 KRBOX1C9JBD0 128 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 TAGLN2P37802 199 aaKnown RBP4.17□□□□□ -1.74
PTCD3-215ENST00000484203 PKIAP61925 76 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 ELOBQ15370 118 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 ZNF674Q2M3X9 581 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 KCNIP4Q6PIL6 250 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 WFDC10BQ8IUB3 73 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 FAM213BQ8TBF2 198 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 RMI2Q96E14 147 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 LINC00479Q96M42 142 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 CHCHD7Q9BUK0 85 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 PARLQ9H300 379 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 MANBALQ9NQG1 85 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 BIN3Q9NQY0 253 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 URGCP-MRPS24S4R325 110 aa4.17□□□□□ -1.74
PTCD3-215ENST00000484203 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
PTCD3-215ENST00000484203 A0A087WTM6 91 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 TRAV1-1A0A0B4J248 108 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 XKRY2A2RUG3 117 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 G3V3Q6 166 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 PAGE4O60829 102 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 SH2D1AO60880 128 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 ARMS2P0C7Q2 107 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 BAGE2Q86Y30 109 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 SMIM12Q96EX1 92 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 ZC2HC1AQ96GY0 325 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 SFRP2Q96HF1 295 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 SCRT2Q9NQ03 307 aa4.16□□□□□ -1.74
PTCD3-215ENST00000484203 IGHV3-73A0A0B4J1V6 119 aa4.15□□□□□ -1.75
PTCD3-215ENST00000484203 LOC100131303A0A0U1RQF7 123 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms