RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
SMAD9-204ENST00000483941 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
SMAD9-204ENST00000483941 PPBPP02775 128 aa10.07□□□□□ -0.8
SMAD9-204ENST00000483941 AZU1P20160 251 aa10.07□□□□□ -0.8
SMAD9-204ENST00000483941 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
SMAD9-204ENST00000483941 RHODO00212 210 aa10.06□□□□□ -0.8
SMAD9-204ENST00000483941 PPP1R17O96001 155 aa10.06□□□□□ -0.8
SMAD9-204ENST00000483941 TRGC2P03986 189 aa10.06□□□□□ -0.8
SMAD9-204ENST00000483941 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
SMAD9-204ENST00000483941 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
SMAD9-204ENST00000483941 MUC7Q8TAX7 377 aa10.06□□□□□ -0.8
SMAD9-204ENST00000483941 X6R8D5 127 aa10.06□□□□□ -0.8
SMAD9-204ENST00000483941 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
SMAD9-204ENST00000483941 SPATA25Q9BR10 227 aa10.05□□□□□ -0.8
SMAD9-204ENST00000483941 MSRB1Q9NZV6 116 aa10.05□□□□□ -0.8
SMAD9-204ENST00000483941 TRGV1A0A0A0MS02 117 aa10.04□□□□□ -0.8
SMAD9-204ENST00000483941 EVI2AP22794 236 aa10.04□□□□□ -0.8
SMAD9-204ENST00000483941 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
SMAD9-204ENST00000483941 NOP10Q9NPE3 64 aaKnown RBP10.04□□□□□ -0.8
SMAD9-204ENST00000483941 LAMTOR2Q9Y2Q5 125 aa10.04□□□□□ -0.8
SMAD9-204ENST00000483941 LCE6AA0A183 80 aa10.03□□□□□ -0.8
SMAD9-204ENST00000483941 PRM2P04554 102 aa10.03□□□□□ -0.8
SMAD9-204ENST00000483941 RAB4AP20338 218 aa10.03□□□□□ -0.8
SMAD9-204ENST00000483941 CKS2P33552 79 aa10.03□□□□□ -0.8
SMAD9-204ENST00000483941 ZFP2Q6ZN57 461 aa10.03□□□□□ -0.8
SMAD9-204ENST00000483941 ORMDL3Q8N138 153 aa10.03□□□□□ -0.8
SMAD9-204ENST00000483941 C14orf178Q8N769 122 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-204ENST00000483941 ZMAT4Q9H898 229 aa10.03□□□□□ -0.8
SMAD9-204ENST00000483941 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
SMAD9-204ENST00000483941 H7C1H1 209 aa10.02□□□□□ -0.81
SMAD9-204ENST00000483941 SPART-AS1P0CW21 52 aa10.02□□□□□ -0.81
SMAD9-204ENST00000483941 SLAQ13239 276 aa10.02□□□□□ -0.81
SMAD9-204ENST00000483941 AMN1Q8IY45 258 aa10.02□□□□□ -0.81
SMAD9-204ENST00000483941 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.81
SMAD9-204ENST00000483941 C18orf15Q96N68 181 aa10.02□□□□□ -0.81
SMAD9-204ENST00000483941 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 F5H697 171 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 RS1O15537 224 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 EMP1P54849 157 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 MRPL51Q4U2R6 128 aaKnown RBP10.01□□□□□ -0.81
SMAD9-204ENST00000483941 POM121L12Q8N7R1 296 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 KRTAP17-1Q9BYP8 105 aa10.01□□□□□ -0.81
SMAD9-204ENST00000483941 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
SMAD9-204ENST00000483941 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 PHOX2AO14813 284 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 S100A6P06703 90 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 CRYGDP07320 174 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 MGPP08493 103 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 CFAP126Q5VTH2 177 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 Q8NAQ8 132 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 TM2D3Q9BRN9 247 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 KIF25-AS1Q9Y6Z4 181 aa10□□□□□ -0.81
SMAD9-204ENST00000483941 PLECQ15149 4684 aaKnown RBP9.99□□□□□ -0.81
SMAD9-204ENST00000483941 A0A087WWL8 130 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 SRIP30626 198 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 ZNF56Q15929 161 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 OR10J3Q5JRS4 329 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 Q6ZTI0 123 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 SBSPONQ8IVN8 264 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 RNF185Q96GF1 192 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 PRELID3AQ96N28 172 aa9.99□□□□□ -0.81
SMAD9-204ENST00000483941 ALKBH7Q9BT30 221 aaPredicted RBP9.99□□□□□ -0.81
SMAD9-204ENST00000483941 C11orf68Q9H3H3 251 aaKnown RBP9.99□□□□□ -0.81
SMAD9-204ENST00000483941 GAGE12BA1L429 117 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 D6R8Y8 96 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 GAGE7O76087 117 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 GAGE12FP0CL80 117 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 GAGE12GP0CL81 117 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 GAGE12IP0CL82 117 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 KIAA1644Q3SXP7 199 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 LINC00612Q8N6U2 182 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 EDA2RQ9HAV5 297 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 DKK2Q9UBU2 259 aa9.98□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BKO60814 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BJP06899 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BOP23527 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BBP33778 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BDP58876 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 LINC00315P59091 139 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 DAD1P61803 113 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BCP62807 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 Q0VG73 95 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST2H2BEQ16778 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.97□□□□□ -0.81
SMAD9-204ENST00000483941 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BHQ93079 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BNQ99877 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 HIST1H2BMQ99879 126 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 JPT2Q9H910 190 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 MUC4Q99102 2169 aa9.97□□□□□ -0.81
SMAD9-204ENST00000483941 DEFB130BP0DP73 79 aa9.96□□□□□ -0.82
SMAD9-204ENST00000483941 DEFB130AP0DP74 79 aa9.96□□□□□ -0.82
SMAD9-204ENST00000483941 UFSP1Q6NVU6 142 aa9.96□□□□□ -0.82
SMAD9-204ENST00000483941 BAGE3Q86Y29 109 aa9.96□□□□□ -0.82
SMAD9-204ENST00000483941 C20orf78Q9BR46 151 aa9.96□□□□□ -0.82
SMAD9-204ENST00000483941 SAMD10Q9BYL1 202 aa9.96□□□□□ -0.82
SMAD9-204ENST00000483941 MAP1LC3AQ9H492 121 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms