RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ALPK3Q96L96 1907 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 KIAA1549Q9HCM3 1950 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 TRAV23DV6A0A075B6W5 121 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 LOC110117498A0A087WWA1 95 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 RBAKDNA6NC62 111 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 HIGD1CA8MV81 97 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 TFF1P04155 84 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 SNCAP37840 140 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 ZNF818PQ6ZRF7 136 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 CYP2G1PQ6ZSU1 146 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 MYOZ3Q8TDC0 251 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 C10orf82Q8WW14 230 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 VAMP8Q9BV40 100 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 CYP4F30PQ9H0H9 118 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 GAPVD1Q14C86 1478 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 CDK12Q9NYV4 1490 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-214ENST00000483925 BRWD1Q9NSI6 2320 aa2.11□□□□□ -2.07
PTCD3-214ENST00000483925 MYO9BQ13459 2157 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 DIDO1Q9BTC0 2240 aaKnown RBP2.1□□□□□ -2.07
PTCD3-214ENST00000483925 ANK1P16157 1881 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 TEX49A0A1B0GTD5 131 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 SPRNQ5BIV9 151 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 C9orf62Q8N4C0 152 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 C15orf53Q8NAA6 179 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 STRCP1A6NGW2 1772 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 AKAP12Q02952 1782 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 RBBP6Q7Z6E9 1792 aaKnown RBP2.1□□□□□ -2.07
PTCD3-214ENST00000483925 MICAL3Q7RTP6 2002 aa2.1□□□□□ -2.07
PTCD3-214ENST00000483925 PLXNA4Q9HCM2 1894 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 SCAPERQ9BY12 1400 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 HCRTO43612 131 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 SIX6O95475 246 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 KRTDAPP60985 99 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 GDF5OSQ5U4N7 250 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 SCP2D1Q9UJQ7 156 aa2.09□□□□□ -2.07
PTCD3-214ENST00000483925 BAZ1AQ9NRL2 1556 aaPredicted RBP2.09□□□□□ -2.08
PTCD3-214ENST00000483925 PPIP5K1Q6PFW1 1433 aa2.08□□□□□ -2.08
PTCD3-214ENST00000483925 MAGI1Q96QZ7 1491 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-214ENST00000483925 LAMB1P07942 1786 aa2.08□□□□□ -2.08
PTCD3-214ENST00000483925 RPL37AP61513 92 aaKnown RBP2.08□□□□□ -2.08
PTCD3-214ENST00000483925 DEFB103AP81534 67 aa2.08□□□□□ -2.08
PTCD3-214ENST00000483925 ZNF625Q96I27 306 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-214ENST00000483925 AMELYQ99218 206 aa2.08□□□□□ -2.08
PTCD3-214ENST00000483925 LINC00312Q9Y6C7 94 aa2.08□□□□□ -2.08
PTCD3-214ENST00000483925 CASKIN1Q8WXD9 1431 aa2.08□□□□□ -2.08
PTCD3-214ENST00000483925 MPDZO75970 2070 aa2.07□□□□□ -2.08
PTCD3-214ENST00000483925 ROBO1Q9Y6N7 1651 aa2.07□□□□□ -2.08
PTCD3-214ENST00000483925 NAP1L6A6NFF2 107 aa2.07□□□□□ -2.08
PTCD3-214ENST00000483925 MT-ATP8P03928 68 aa2.07□□□□□ -2.08
PTCD3-214ENST00000483925 PPP1R1CQ8WVI7 109 aa2.07□□□□□ -2.08
PTCD3-214ENST00000483925 RP1P56715 2156 aa2.07□□□□□ -2.08
PTCD3-214ENST00000483925 COL5A3P25940 1745 aaPredicted RBP2.06□□□□□ -2.08
PTCD3-214ENST00000483925 ANKRD26Q9UPS8 1709 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 TRBV6-7A0A0A0MS04 114 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 TRBV7-1A0A0A6YYK4 115 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 GNGT2O14610 69 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 UBE2D1P51668 147 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 GNG11P61952 73 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 Q0VG73 95 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 DEFB132Q7Z7B7 95 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 CYSTM1Q9H1C7 97 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 MCM3APO60318 1980 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 ABCC5O15440 1437 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 CC2D2AQ9P2K1 1620 aa2.06□□□□□ -2.08
PTCD3-214ENST00000483925 PLXNA2O75051 1894 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 EML5Q05BV3 1969 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 UNQ6190/PRO20217Q6UXQ8 127 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 ZNF563Q8TA94 476 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 CCDC18Q5T9S5 1454 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 SIP14410 1827 aa2.05□□□□□ -2.08
PTCD3-214ENST00000483925 IGKV3D-7A0A0C4DH55 119 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 IGKV3OR2-268A0A0C4DH90 116 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 IL9P15248 144 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 MDC1Q14676 2089 aaKnown RBP2.04□□□□□ -2.08
PTCD3-214ENST00000483925 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 CEP192Q8TEP8 1941 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 TRPM7Q96QT4 1865 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 PMCHL2Q9BQD1 86 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 FAIMQ9NVQ4 179 aa2.04□□□□□ -2.08
PTCD3-214ENST00000483925 PTPRFP10586 1907 aa2.03□□□□□ -2.08
PTCD3-214ENST00000483925 ZNF142P52746 1687 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-214ENST00000483925 BLMP54132 1417 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-214ENST00000483925 LOC101927531A0A1B0GV80 90 aa2.03□□□□□ -2.08
PTCD3-214ENST00000483925 ATOX1O00244 68 aa2.03□□□□□ -2.08
PTCD3-214ENST00000483925 IGLC1P0CG04 106 aa2.03□□□□□ -2.08
PTCD3-214ENST00000483925 ASIPP42127 132 aa2.03□□□□□ -2.08
PTCD3-214ENST00000483925 SSBP1Q04837 148 aaKnown RBP2.03□□□□□ -2.08
PTCD3-214ENST00000483925 XAF1Q6GPH4 301 aa2.03□□□□□ -2.08
PTCD3-214ENST00000483925 CTTNBP2Q8WZ74 1663 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 MED14O60244 1454 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 hADV29S1A0JD25 119 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 FXYD3Q14802 87 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 C10orf128Q5T292 105 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 FAM74A4Q5TZK3 123 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 C20orf197Q8N268 126 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 LINC00474Q9P2X8 69 aa2.02□□□□□ -2.09
PTCD3-214ENST00000483925 MUC22E2RYF6 1773 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms