RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TRAV4A0A0B4J268 109 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 IGHV3-16A0A0C4DH30 117 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 IGHV3-30P01768 117 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 IGHV3-33P01772 117 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 IGHV3-30-3P0DP02 117 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 IGHV3-30-5P0DP03 117 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 FGF7P21781 194 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 PPT1P50897 306 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 RANP62826 216 aaKnown RBP4.91□□□□□ -1.62
CSDE1-206ENST00000483030 ZNF266Q14584 549 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 LINC01556Q5JQF7 62 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 OR10J3Q5JRS4 329 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 FAM159AQ6UWV7 190 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 SH2D6Q7Z4S9 175 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 FAM167A-AS1Q96KT0 104 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 SLC25A2Q9BXI2 301 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 C11orf1Q9H5F2 150 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 WFDC1Q9HC57 220 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 SPANXA1Q9NS26 97 aa4.91□□□□□ -1.62
CSDE1-206ENST00000483030 TRGV11A0A075B6L2 103 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 TRAV8-6A0A0B4J262 113 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 IGSF23A1L1A6 192 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 GNRH2O43555 120 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 BTCP35070 178 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 CSN1S1P47710 185 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 SULT1A1P50225 295 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 IFITM3Q01628 133 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 WFDC2Q14508 124 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 Q6ZSA8 131 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 MIR17HGQ75NE6 70 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 TMEM252Q8N6L7 170 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 ORAOV1Q8WV07 137 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
CSDE1-206ENST00000483030 SDHCQ99643 169 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-206ENST00000483030 NKX6-2Q9C056 277 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-206ENST00000483030 F6UZH7 168 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 M0R2P5 195 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 LECT2O14960 151 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 RS1O15537 224 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 SSNA1O43805 119 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 PFN1P07737 140 aaKnown RBP4.89□□□□□ -1.63
CSDE1-206ENST00000483030 GATA1P15976 413 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-206ENST00000483030 S100A2P29034 98 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 S100A10P60903 97 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 HBG1P69891 147 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 HBG2P69892 147 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 GAGE13Q4V321 117 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 Q6AWC8 147 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 LINC01551Q86U37 167 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 PHYHIPLQ96FC7 376 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 C2orf50Q96LR7 162 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 PAXXQ9BUH6 204 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 CCDC32Q9BV29 185 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 TM2D2Q9BX73 214 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 MAP1LC3CQ9BXW4 147 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 NPCDR1Q9BY65 106 aa4.89□□□□□ -1.63
CSDE1-206ENST00000483030 LYRM2Q9NU23 88 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-206ENST00000483030 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-206ENST00000483030 TGIF2-C20orf24A0A0A6YYL0 155 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 RBAKDNA6NC62 111 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 FAM74A7A6NL05 159 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 FABP9Q0Z7S8 132 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 TDRG1Q3Y452 100 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 FAM74A3Q4VXF1 159 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 SCXQ7RTU7 201 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 SLC25A29Q8N8R3 303 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 THAP6Q8TBB0 222 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 ASB13Q8WXK3 278 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 SNHG12Q9BXW3 62 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 PLA2G2DQ9UNK4 145 aa4.88□□□□□ -1.63
CSDE1-206ENST00000483030 IGHV3-73A0A0B4J1V6 119 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 DIRC3C9JPN6 131 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 OR7C2O60412 319 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 OXTP01178 125 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 CKS1BP61024 79 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 RPL32P62910 135 aaKnown RBP4.87□□□□□ -1.63
CSDE1-206ENST00000483030 IL15RAQ13261 267 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 UBE2V1Q13404 147 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 OCIAD2Q56VL3 154 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 PYY3Q5JQD4 70 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 LELP1Q5T871 98 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 PRADC1Q9BSG0 188 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 GTSF1LQ9H1H1 148 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 LENEPQ9Y5L5 61 aa4.87□□□□□ -1.63
CSDE1-206ENST00000483030 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 A0A0U1RRA0 63 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 TRBV6-4A0A1B0GX49 114 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 B5MCH6 92 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 PLA2G10O15496 165 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 PDE6DO43924 150 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 TYMSP04818 313 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-206ENST00000483030 LAGE3Q14657 143 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 PDZD11Q5EBL8 140 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 C6orf226Q5I0X4 101 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms