RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 A0A087WWL8 130 aa13.44□□□□□ -0.26
MSH5-215ENST00000482280 Q6ZSN1 163 aa13.44□□□□□ -0.26
MSH5-215ENST00000482280 SFRP2Q96HF1 295 aa13.44□□□□□ -0.26
MSH5-215ENST00000482280 URGCP-MRPS24S4R325 110 aa13.44□□□□□ -0.26
MSH5-215ENST00000482280 IBA57-AS1B1ANH7 110 aa13.43□□□□□ -0.26
MSH5-215ENST00000482280 IFNA1P01562 189 aa13.42□□□□□ -0.26
MSH5-215ENST00000482280 TOR2AQ5JU69 321 aa13.42□□□□□ -0.26
MSH5-215ENST00000482280 KCNIP4Q6PIL6 250 aa13.42□□□□□ -0.26
MSH5-215ENST00000482280 C14orf178Q8N769 122 aaPredicted RBP13.42□□□□□ -0.26
MSH5-215ENST00000482280 KRTAP17-1Q9BYP8 105 aa13.42□□□□□ -0.26
MSH5-215ENST00000482280 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
MSH5-215ENST00000482280 RPL36AP83881 106 aaKnown RBP13.41□□□□□ -0.26
MSH5-215ENST00000482280 SPANXN1Q5VSR9 72 aa13.41□□□□□ -0.26
MSH5-215ENST00000482280 UFSP1Q6NVU6 142 aa13.41□□□□□ -0.26
MSH5-215ENST00000482280 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.41□□□□□ -0.26
MSH5-215ENST00000482280 RPL36ALQ969Q0 106 aaKnown RBP13.41□□□□□ -0.26
MSH5-215ENST00000482280 DAZAP1Q96EP5 407 aaKnown RBP13.41□□□□□ -0.26
MSH5-215ENST00000482280 TM2D2Q9BX73 214 aa13.41□□□□□ -0.26
MSH5-215ENST00000482280 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
MSH5-215ENST00000482280 CXCL1P09341 107 aa13.4□□□□□ -0.26
MSH5-215ENST00000482280 RPL35P42766 123 aaKnown RBP13.4□□□□□ -0.26
MSH5-215ENST00000482280 LAGE3Q14657 143 aa13.4□□□□□ -0.26
MSH5-215ENST00000482280 TCTE3Q8IZS6 198 aa13.4□□□□□ -0.26
MSH5-215ENST00000482280 TRBV10-1A0A0K0K1A3 114 aa13.39□□□□□ -0.27
MSH5-215ENST00000482280 RPL19P84098 196 aaKnown RBP13.39□□□□□ -0.27
MSH5-215ENST00000482280 ZNF56Q15929 161 aa13.39□□□□□ -0.27
MSH5-215ENST00000482280 TRAV8-3A0A0A6YYJ7 113 aa13.38□□□□□ -0.27
MSH5-215ENST00000482280 SMIM17P0DL12 118 aa13.38□□□□□ -0.27
MSH5-215ENST00000482280 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
MSH5-215ENST00000482280 PDE6DO43924 150 aa13.37□□□□□ -0.27
MSH5-215ENST00000482280 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
MSH5-215ENST00000482280 SULT1A2P50226 295 aa13.37□□□□□ -0.27
MSH5-215ENST00000482280 CCL20P78556 96 aa13.37□□□□□ -0.27
MSH5-215ENST00000482280 SLC51BQ86UW2 128 aa13.37□□□□□ -0.27
MSH5-215ENST00000482280 DNAH11Q96DT5 4516 aa13.37□□□□□ -0.27
MSH5-215ENST00000482280 F5H697 171 aa13.36□□□□□ -0.27
MSH5-215ENST00000482280 C1QBP02746 253 aa13.36□□□□□ -0.27
MSH5-215ENST00000482280 FUSP35637 526 aaKnown RBP eCLIP13.36□□□□□ -0.27
MSH5-215ENST00000482280 GNG4P50150 75 aa13.36□□□□□ -0.27
MSH5-215ENST00000482280 RAB4BP61018 213 aa13.36□□□□□ -0.27
MSH5-215ENST00000482280 CENPWQ5EE01 88 aa13.36□□□□□ -0.27
MSH5-215ENST00000482280 OR10AG1Q8NH19 301 aa13.36□□□□□ -0.27
MSH5-215ENST00000482280 C11orf52Q96A22 123 aa13.36□□□□□ -0.27
MSH5-215ENST00000482280 TRBV7-3A0A075B6L6 115 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 A0A087WX48 190 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 IGLV5-52A0A0A0MRZ9 124 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 XKRY2A2RUG3 117 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 OR5AL1P0C617 328 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 SSTP61278 116 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 MEF2BQ02080 365 aaPredicted RBP13.35□□□□□ -0.27
MSH5-215ENST00000482280 RMI2Q96E14 147 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 TPPP3Q9BW30 176 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 BIN3Q9NQY0 253 aa13.35□□□□□ -0.27
MSH5-215ENST00000482280 GCSHP23434 173 aa13.34□□□□□ -0.27
MSH5-215ENST00000482280 RPS20P60866 119 aaKnown RBP13.34□□□□□ -0.27
MSH5-215ENST00000482280 ELOBQ15370 118 aa13.34□□□□□ -0.27
MSH5-215ENST00000482280 Q8N1X5 172 aa13.34□□□□□ -0.27
MSH5-215ENST00000482280 NTN5Q8WTR8 489 aaPredicted RBP13.34□□□□□ -0.27
MSH5-215ENST00000482280 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
MSH5-215ENST00000482280 MED9Q9NWA0 146 aa13.34□□□□□ -0.27
MSH5-215ENST00000482280 Q9UF83 564 aa13.34□□□□□ -0.27
MSH5-215ENST00000482280 COX11Q9Y6N1 276 aa13.34□□□□□ -0.27
MSH5-215ENST00000482280 SNAI2O43623 268 aa13.33□□□□□ -0.28
MSH5-215ENST00000482280 TAGLN2P37802 199 aaKnown RBP13.33□□□□□ -0.28
MSH5-215ENST00000482280 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
MSH5-215ENST00000482280 SMIM12Q96EX1 92 aa13.33□□□□□ -0.28
MSH5-215ENST00000482280 AP1S3Q96PC3 154 aa13.33□□□□□ -0.28
MSH5-215ENST00000482280 MUC21A0A0G2JKD1 596 aa13.32□□□□□ -0.28
MSH5-215ENST00000482280 MUC21A0A140T8X8 626 aa13.32□□□□□ -0.28
MSH5-215ENST00000482280 DAZ4Q86SG3 579 aaKnown RBP13.32□□□□□ -0.28
MSH5-215ENST00000482280 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
MSH5-215ENST00000482280 SSBP4Q9BWG4 385 aaPredicted RBP13.32□□□□□ -0.28
MSH5-215ENST00000482280 DAZ3Q9NR90 486 aaKnown RBP13.32□□□□□ -0.28
MSH5-215ENST00000482280 VAX2Q9UIW0 290 aa13.32□□□□□ -0.28
MSH5-215ENST00000482280 DYNC1H1Q14204 4646 aaKnown RBP13.32□□□□□ -0.28
MSH5-215ENST00000482280 BCL2P10415 239 aa13.31□□□□□ -0.28
MSH5-215ENST00000482280 Q8N814 137 aa13.31□□□□□ -0.28
MSH5-215ENST00000482280 FER1L6-AS1Q8NA97 138 aa13.31□□□□□ -0.28
MSH5-215ENST00000482280 TMEM262E9PQX1 116 aa13.3□□□□□ -0.28
MSH5-215ENST00000482280 P01737 135 aa13.3□□□□□ -0.28
MSH5-215ENST00000482280 UBE2D3P61077 147 aa13.3□□□□□ -0.28
MSH5-215ENST00000482280 UBE2D2P62837 147 aa13.3□□□□□ -0.28
MSH5-215ENST00000482280 NIT1Q86X76 327 aa13.3□□□□□ -0.28
MSH5-215ENST00000482280 Q8N3U1 123 aa13.3□□□□□ -0.28
MSH5-215ENST00000482280 CHCHD7Q9BUK0 85 aa13.3□□□□□ -0.28
MSH5-215ENST00000482280 RAB19A4D1S5 217 aa13.29□□□□□ -0.28
MSH5-215ENST00000482280 LRCOL1A6NCL2 159 aa13.29□□□□□ -0.28
MSH5-215ENST00000482280 PKIAP61925 76 aa13.29□□□□□ -0.28
MSH5-215ENST00000482280 Q6ZNX1 250 aa13.29□□□□□ -0.28
MSH5-215ENST00000482280 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
MSH5-215ENST00000482280 hCG_2014768A0A024R1R8 64 aa13.28□□□□□ -0.28
MSH5-215ENST00000482280 RBFOX3A6NFN3 312 aa13.28□□□□□ -0.28
MSH5-215ENST00000482280 CACNG7P62955 275 aa13.28□□□□□ -0.28
MSH5-215ENST00000482280 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
MSH5-215ENST00000482280 KLK12Q9UKR0 248 aa13.28□□□□□ -0.28
MSH5-215ENST00000482280 H7C1H1 209 aa13.27□□□□□ -0.29
MSH5-215ENST00000482280 MGPP08493 103 aa13.27□□□□□ -0.29
MSH5-215ENST00000482280 KRTAP10-1P60331 282 aa13.27□□□□□ -0.29
MSH5-215ENST00000482280 NEXN-AS1Q8NBZ9 246 aa13.27□□□□□ -0.29
MSH5-215ENST00000482280 KRTAP4-5Q9BYR2 181 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms