RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 ZFP2Q6ZN57 461 aa12.06□□□□□ -0.48
DDR1-243ENST00000482050 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
DDR1-243ENST00000482050 MSRB1Q9NZV6 116 aa12.06□□□□□ -0.48
DDR1-243ENST00000482050 LINC00588Q9Y4M8 146 aa12.06□□□□□ -0.48
DDR1-243ENST00000482050 A0A1W2PPQ1 181 aa12.05□□□□□ -0.48
DDR1-243ENST00000482050 RHODO00212 210 aa12.05□□□□□ -0.48
DDR1-243ENST00000482050 SRIP30626 198 aa12.05□□□□□ -0.48
DDR1-243ENST00000482050 ESRGQ1W209 222 aa12.05□□□□□ -0.48
DDR1-243ENST00000482050 RNF212Q495C1 297 aa12.05□□□□□ -0.48
DDR1-243ENST00000482050 C14orf178Q8N769 122 aaPredicted RBP12.05□□□□□ -0.48
DDR1-243ENST00000482050 GTSF1Q8WW33 167 aa12.05□□□□□ -0.48
DDR1-243ENST00000482050 PRADC1Q9BSG0 188 aa12.05□□□□□ -0.48
DDR1-243ENST00000482050 TRBV6-4A0A1B0GX49 114 aa12.04□□□□□ -0.48
DDR1-243ENST00000482050 F2Z2F3 143 aa12.04□□□□□ -0.48
DDR1-243ENST00000482050 CACNG7P62955 275 aa12.04□□□□□ -0.48
DDR1-243ENST00000482050 RHOHQ15669 191 aa12.04□□□□□ -0.48
DDR1-243ENST00000482050 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
DDR1-243ENST00000482050 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
DDR1-243ENST00000482050 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
DDR1-243ENST00000482050 A8MWL6 223 aa12.03□□□□□ -0.48
DDR1-243ENST00000482050 CTRLP40313 264 aa12.03□□□□□ -0.48
DDR1-243ENST00000482050 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
DDR1-243ENST00000482050 AP1S3Q96PC3 154 aa12.03□□□□□ -0.48
DDR1-243ENST00000482050 Q9UF83 564 aa12.03□□□□□ -0.48
DDR1-243ENST00000482050 SMIM17P0DL12 118 aa12.02□□□□□ -0.49
DDR1-243ENST00000482050 ZNF56Q15929 161 aa12.02□□□□□ -0.49
DDR1-243ENST00000482050 PGLYRP4Q96LB8 373 aa12.02□□□□□ -0.49
DDR1-243ENST00000482050 V9GYV3 84 aa12.02□□□□□ -0.49
DDR1-243ENST00000482050 VPS13DQ5THJ4 4388 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 NTF3P20783 257 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 GAGE1Q13065 139 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 GAGE4Q13068 117 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 GAGE5Q13069 117 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 CT83Q5H943 113 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 COMMD7Q86VX2 200 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 OR10G8Q8NGN5 311 aa12.01□□□□□ -0.49
DDR1-243ENST00000482050 F5H697 171 aa12□□□□□ -0.49
DDR1-243ENST00000482050 M0R2N4 97 aa12□□□□□ -0.49
DDR1-243ENST00000482050 MGPP08493 103 aa12□□□□□ -0.49
DDR1-243ENST00000482050 TWIST1Q15672 202 aa12□□□□□ -0.49
DDR1-243ENST00000482050 LYPD5Q6UWN5 251 aa12□□□□□ -0.49
DDR1-243ENST00000482050 ZNRF2Q8NHG8 242 aa12□□□□□ -0.49
DDR1-243ENST00000482050 TSKUQ8WUA8 353 aa12□□□□□ -0.49
DDR1-243ENST00000482050 RYR2Q92736 4967 aa12□□□□□ -0.49
DDR1-243ENST00000482050 HYDINQ4G0P3 5121 aa11.99□□□□□ -0.49
DDR1-243ENST00000482050 EVI2AP22794 236 aa11.99□□□□□ -0.49
DDR1-243ENST00000482050 MRPS16Q9Y3D3 137 aaKnown RBP11.99□□□□□ -0.49
DDR1-243ENST00000482050 KIF25-AS1Q9Y6Z4 181 aa11.99□□□□□ -0.49
DDR1-243ENST00000482050 RYR3Q15413 4870 aa11.98□□□□□ -0.49
DDR1-243ENST00000482050 HIGD1CA8MV81 97 aa11.98□□□□□ -0.49
DDR1-243ENST00000482050 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
DDR1-243ENST00000482050 FAM3BP58499 235 aaPredicted RBP11.98□□□□□ -0.49
DDR1-243ENST00000482050 RAB4BP61018 213 aa11.98□□□□□ -0.49
DDR1-243ENST00000482050 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
DDR1-243ENST00000482050 UQCC3Q6UW78 93 aa11.98□□□□□ -0.49
DDR1-243ENST00000482050 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
DDR1-243ENST00000482050 LINC00315P59091 139 aa11.97□□□□□ -0.49
DDR1-243ENST00000482050 SH2D6Q7Z4S9 175 aa11.96□□□□□ -0.49
DDR1-243ENST00000482050 ATP6V0E2Q8NHE4 81 aa11.96□□□□□ -0.49
DDR1-243ENST00000482050 BORCS7Q96B45 105 aa11.96□□□□□ -0.49
DDR1-243ENST00000482050 GFRA4Q9GZZ7 299 aa11.96□□□□□ -0.49
DDR1-243ENST00000482050 Q9H8V8 135 aa11.96□□□□□ -0.49
DDR1-243ENST00000482050 LINC00862A6NCI5 91 aa11.95□□□□□ -0.5
DDR1-243ENST00000482050 ADCYAP1P18509 176 aa11.95□□□□□ -0.5
DDR1-243ENST00000482050 FOXA3P55318 350 aaPredicted RBP11.95□□□□□ -0.5
DDR1-243ENST00000482050 UPK3BQ9BT76 320 aa11.95□□□□□ -0.5
DDR1-243ENST00000482050 DPH3P1Q9H4G8 78 aa11.95□□□□□ -0.5
DDR1-243ENST00000482050 KMT2AQ03164 3969 aa11.95□□□□□ -0.5
DDR1-243ENST00000482050 A0A1B0GUT8 65 aa11.94□□□□□ -0.5
DDR1-243ENST00000482050 TMEM218A2RU14 115 aa11.94□□□□□ -0.5
DDR1-243ENST00000482050 FAM231BA6NCW3 169 aa11.94□□□□□ -0.5
DDR1-243ENST00000482050 F8W036 122 aa11.94□□□□□ -0.5
DDR1-243ENST00000482050 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
DDR1-243ENST00000482050 NUP35Q8NFH5 326 aa11.94□□□□□ -0.5
DDR1-243ENST00000482050 TRBV10-1A0A0K0K1A3 114 aa11.93□□□□□ -0.5
DDR1-243ENST00000482050 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
DDR1-243ENST00000482050 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
DDR1-243ENST00000482050 SUMO4Q6EEV6 95 aa11.93□□□□□ -0.5
DDR1-243ENST00000482050 SMIM15Q7Z3B0 74 aa11.93□□□□□ -0.5
DDR1-243ENST00000482050 NEXN-AS1Q8NBZ9 246 aa11.93□□□□□ -0.5
DDR1-243ENST00000482050 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
DDR1-243ENST00000482050 NAT8BQ9UHF3 227 aa11.93□□□□□ -0.5
DDR1-243ENST00000482050 WFDC10BQ8IUB3 73 aa11.92□□□□□ -0.5
DDR1-243ENST00000482050 GTSF1LQ9H1H1 148 aa11.92□□□□□ -0.5
DDR1-243ENST00000482050 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
DDR1-243ENST00000482050 NBDYA0A0U1RRE5 68 aa11.91□□□□□ -0.5
DDR1-243ENST00000482050 SMIM27A0A1W2PRY6 76 aa11.91□□□□□ -0.5
DDR1-243ENST00000482050 SIVA1O15304 175 aa11.91□□□□□ -0.5
DDR1-243ENST00000482050 Q6ZR54 194 aa11.91□□□□□ -0.5
DDR1-243ENST00000482050 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
DDR1-243ENST00000482050 M0QY20 66 aa11.9□□□□□ -0.5
DDR1-243ENST00000482050 UBE2D3P61077 147 aa11.9□□□□□ -0.5
DDR1-243ENST00000482050 UBE2D2P62837 147 aa11.9□□□□□ -0.5
DDR1-243ENST00000482050 RIGQ13278 110 aa11.9□□□□□ -0.5
DDR1-243ENST00000482050 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
DDR1-243ENST00000482050 DNAH6Q9C0G6 4158 aa11.89□□□□□ -0.51
DDR1-243ENST00000482050 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
DDR1-243ENST00000482050 H7C1H1 209 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms