RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 FASNP49327 2511 aaKnown RBP2.15□□□□□ -2.07
COPA-203ENST00000481040 ABCC8Q09428 1581 aa2.15□□□□□ -2.07
COPA-203ENST00000481040 SPEF2Q9C093 1822 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 FBN3Q75N90 2809 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 RGPD1P0DJD0 1748 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 TTC28Q96AY4 2481 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 ZNF292O60281 2723 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 IGKV3-7A0A075B6H7 116 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 IFNGP01579 166 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 GDF5OSQ5U4N7 250 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 CSAG1Q6PB30 78 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 TMEM203Q969S6 136 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 WFDC10AQ9H1F0 79 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 ADAMTS12P58397 1594 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 LRRC9Q6ZRR7 1453 aa2.14□□□□□ -2.07
COPA-203ENST00000481040 TEP1Q99973 2627 aaKnown RBP2.13□□□□□ -2.07
COPA-203ENST00000481040 IGKV2-40A0A087WW87 121 aaPredicted RBP2.13□□□□□ -2.07
COPA-203ENST00000481040 J3QKU1 62 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 IGKV2D-40P01614 121 aaPredicted RBP2.13□□□□□ -2.07
COPA-203ENST00000481040 APODP05090 189 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 IL7P13232 177 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 RHOHQ15669 191 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 LINC01545Q5VT33 79 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 DYNLRB2Q8TF09 96 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 C12orf57Q99622 126 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 SMG6Q86US8 1419 aaKnown RBP2.13□□□□□ -2.07
COPA-203ENST00000481040 C5orf42Q9H799 3197 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 USP24Q9UPU5 2620 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 KIF14Q15058 1648 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 USP32Q8NFA0 1604 aa2.13□□□□□ -2.07
COPA-203ENST00000481040 PTPN13Q12923 2485 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 REV3LO60673 3130 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 TRAV12-2A0A075B6T6 113 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 TRAV2A0A0B4J234 112 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 TRAV17A0A0B4J275 112 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 TMEM30CPA0ZSE6 113 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 IGLV3-1P01715 115 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 POLR2JP52435 117 aaKnown RBP2.12□□□□□ -2.07
COPA-203ENST00000481040 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.12□□□□□ -2.07
COPA-203ENST00000481040 VSTM2AQ8TAG5 236 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 OBSCN-AS1Q96MR7 158 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 USP34Q70CQ2 3546 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 MYO18BQ8IUG5 2567 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 DCHS1Q96JQ0 3298 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 MBD5Q9P267 1494 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 TET3O43151 1660 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 MAP3K1Q13233 1512 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 ZFYVE16Q7Z3T8 1539 aa2.12□□□□□ -2.07
COPA-203ENST00000481040 CFAP54Q96N23 3096 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 AKAP11Q9UKA4 1901 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 TRAV23DV6A0A075B6W5 121 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 IGKCP01834 107 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 MEIG1Q5JSS6 88 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 LYPD5Q6UWN5 251 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 PDCD10Q9BUL8 212 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 EFCAB5A4FU69 1503 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 FAM135AQ9P2D6 1515 aa2.11□□□□□ -2.07
COPA-203ENST00000481040 ABCA5Q8WWZ7 1642 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 GCN1Q92616 2671 aaKnown RBP2.1□□□□□ -2.07
COPA-203ENST00000481040 ATP10BO94823 1461 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 ZNF518AQ6AHZ1 1483 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 LOC100130705A0A1B0GUX0 176 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 IGHV3-30P01768 117 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 IGHV3-30-5P0DP03 117 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 PRB4P10163 310 aaPredicted RBP2.1□□□□□ -2.07
COPA-203ENST00000481040 UNQ5815/PRO19632Q6UWF5 114 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 PPDPFLQ8WWR9 84 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 LINC00526Q96FQ7 95 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 GNG8Q9UK08 70 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 TRIOBPQ9H2D6 2365 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 KDM5DQ9BY66 1539 aa2.1□□□□□ -2.07
COPA-203ENST00000481040 DEPDC5O75140 1603 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 BPTFQ12830 3046 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 PLXNA2O75051 1894 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 NAIPQ13075 1403 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 IQGAP1P46940 1657 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 TULP4Q9NRJ4 1543 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 NUPR2A6NF83 97 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 IL9P15248 144 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 PDE6GP18545 87 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 FGF7P21781 194 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 PLPP5Q8NEB5 264 aa2.09□□□□□ -2.07
COPA-203ENST00000481040 SNRNP25Q9BV90 132 aaKnown RBP2.09□□□□□ -2.07
COPA-203ENST00000481040 MROH2AA6NES4 1674 aa2.09□□□□□ -2.08
COPA-203ENST00000481040 ZC3H13Q5T200 1668 aaKnown RBP2.09□□□□□ -2.08
COPA-203ENST00000481040 ABCA3Q99758 1704 aa2.08□□□□□ -2.08
COPA-203ENST00000481040 GYPBP06028 91 aa2.08□□□□□ -2.08
COPA-203ENST00000481040 IQCJQ1A5X6 159 aa2.08□□□□□ -2.08
COPA-203ENST00000481040 OCIAD2Q56VL3 154 aa2.08□□□□□ -2.08
COPA-203ENST00000481040 C14orf144Q96I85 54 aa2.08□□□□□ -2.08
COPA-203ENST00000481040 TCEAL7Q9BRU2 100 aa2.08□□□□□ -2.08
COPA-203ENST00000481040 MRPL36Q9P0J6 103 aaKnown RBP2.08□□□□□ -2.08
COPA-203ENST00000481040 PHRF1Q9P1Y6 1649 aaKnown RBP2.08□□□□□ -2.08
COPA-203ENST00000481040 DNHD1Q96M86 4753 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 ATG2AQ2TAZ0 1938 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 CTTNBP2Q8WZ74 1663 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 IGKV2-29A2NJV5 120 aaPredicted RBP2.07□□□□□ -2.08
COPA-203ENST00000481040 F6UZH7 168 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 HIST1H1DP16402 221 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms