RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 HBBP68871 147 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 TWIST1Q15672 202 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 RASL11AQ6T310 242 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 Q6ZTC4 211 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 OR4C5Q8NGB2 326 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 JPT2Q9H910 190 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 MSRB1Q9NZV6 116 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 KIF25-AS1Q9Y6Z4 181 aa8.87□□□□□ -0.99
TRAPPC12-218ENST00000479897 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
TRAPPC12-218ENST00000479897 YPEL4Q96NS1 127 aa8.86□□□□□ -0.99
TRAPPC12-218ENST00000479897 TMEM191AQ9H0A3 160 aa8.86□□□□□ -0.99
TRAPPC12-218ENST00000479897 DPH3P1Q9H4G8 78 aa8.86□□□□□ -0.99
TRAPPC12-218ENST00000479897 SMCO4Q9NRQ5 59 aa8.86□□□□□ -0.99
TRAPPC12-218ENST00000479897 URGCP-MRPS24S4R325 110 aa8.86□□□□□ -0.99
TRAPPC12-218ENST00000479897 TGP01266 2768 aa8.86□□□□□ -0.99
TRAPPC12-218ENST00000479897 TRBV24-1A0A075B6N3 115 aa8.85□□□□□ -0.99
TRAPPC12-218ENST00000479897 EVI2AP22794 236 aa8.85□□□□□ -0.99
TRAPPC12-218ENST00000479897 LINC00315P59091 139 aa8.85□□□□□ -0.99
TRAPPC12-218ENST00000479897 ELOBQ15370 118 aa8.85□□□□□ -0.99
TRAPPC12-218ENST00000479897 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
TRAPPC12-218ENST00000479897 SMIM15Q7Z3B0 74 aa8.85□□□□□ -0.99
TRAPPC12-218ENST00000479897 TRAV10A0A0B4J240 114 aa8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 SMIM17P0DL12 118 aa8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 FHL2Q14192 279 aa8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 COX19Q49B96 90 aa8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 CBLN2Q8IUK8 224 aa8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 C14orf178Q8N769 122 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 FRZBQ92765 325 aa8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 SAMD10Q9BYL1 202 aa8.84□□□□□ -0.99
TRAPPC12-218ENST00000479897 A0A087WWL8 130 aa8.83□□□□□ -1
TRAPPC12-218ENST00000479897 IGHV3-53P01767 116 aa8.83□□□□□ -1
TRAPPC12-218ENST00000479897 HOXA5P20719 270 aa8.83□□□□□ -1
TRAPPC12-218ENST00000479897 SSTP61278 116 aa8.83□□□□□ -1
TRAPPC12-218ENST00000479897 SLAQ13239 276 aa8.83□□□□□ -1
TRAPPC12-218ENST00000479897 FAM74A4Q5TZK3 123 aa8.83□□□□□ -1
TRAPPC12-218ENST00000479897 TMEM88Q6PEY1 159 aa8.83□□□□□ -1
TRAPPC12-218ENST00000479897 DEFB131BA0A096LNP1 70 aa8.82□□□□□ -1
TRAPPC12-218ENST00000479897 TRBV6-4A0A1B0GX49 114 aa8.82□□□□□ -1
TRAPPC12-218ENST00000479897 CAMPP49913 170 aa8.82□□□□□ -1
TRAPPC12-218ENST00000479897 RAB4BP61018 213 aa8.82□□□□□ -1
TRAPPC12-218ENST00000479897 WWC2-AS2Q96NR7 200 aa8.82□□□□□ -1
TRAPPC12-218ENST00000479897 PRO0255Q9UI72 69 aa8.82□□□□□ -1
TRAPPC12-218ENST00000479897 TGIF2-C20orf24A0A0A6YYL0 155 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 TRGV4A0A0C4DH28 118 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 H3BNG1 76 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 HLA-DQA1P01909 254 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 MT-ND6P03923 174 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 ZNF56Q15929 161 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 PHLDA1Q8WV24 401 aaPredicted RBP8.81□□□□□ -1
TRAPPC12-218ENST00000479897 RNF185Q96GF1 192 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 FAM210BQ96KR6 192 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 GNB1LQ9BYB4 327 aa8.81□□□□□ -1
TRAPPC12-218ENST00000479897 IGHV3-73A0A0B4J1V6 119 aa8.8□□□□□ -1
TRAPPC12-218ENST00000479897 F5H768 121 aa8.8□□□□□ -1
TRAPPC12-218ENST00000479897 K7EQD1 137 aa8.8□□□□□ -1
TRAPPC12-218ENST00000479897 MGPP08493 103 aa8.8□□□□□ -1
TRAPPC12-218ENST00000479897 CRYBA4P53673 196 aa8.8□□□□□ -1
TRAPPC12-218ENST00000479897 RHOHQ15669 191 aa8.8□□□□□ -1
TRAPPC12-218ENST00000479897 TMEM136Q6ZRR5 245 aa8.8□□□□□ -1
TRAPPC12-218ENST00000479897 TRBV10-1A0A0K0K1A3 114 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 NUPR2A6NF83 97 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 H7C1H1 209 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 SCO1O75880 301 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 HTN3P15516 51 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 RAB4AP20338 218 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 AMN1Q8IY45 258 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 SLC25A29Q8N8R3 303 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 MRAP2Q96G30 205 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 HHLA3Q9XRX5 114 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 CSMD3Q7Z407 3707 aa8.79□□□□□ -1
TRAPPC12-218ENST00000479897 DYNC2H1Q8NCM8 4307 aaKnown RBP8.78□□□□□ -1
TRAPPC12-218ENST00000479897 M0QY20 66 aa8.78□□□□□ -1
TRAPPC12-218ENST00000479897 Q6ZSN1 163 aa8.78□□□□□ -1
TRAPPC12-218ENST00000479897 MUC7Q8TAX7 377 aa8.78□□□□□ -1
TRAPPC12-218ENST00000479897 VSIG2Q96IQ7 327 aa8.78□□□□□ -1
TRAPPC12-218ENST00000479897 TRAV26-1A0A087WT03 109 aa8.77□□□□□ -1.01
TRAPPC12-218ENST00000479897 F5H697 171 aa8.77□□□□□ -1.01
TRAPPC12-218ENST00000479897 PPBPP02775 128 aa8.77□□□□□ -1.01
TRAPPC12-218ENST00000479897 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
TRAPPC12-218ENST00000479897 MRPL51Q4U2R6 128 aaKnown RBP8.77□□□□□ -1.01
TRAPPC12-218ENST00000479897 CEMP1Q6PRD7 247 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC12-218ENST00000479897 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
TRAPPC12-218ENST00000479897 COLCA2A8K830 154 aa8.76□□□□□ -1.01
TRAPPC12-218ENST00000479897 PAX4O43316 350 aa8.76□□□□□ -1.01
TRAPPC12-218ENST00000479897 C15orf53Q8NAA6 179 aa8.76□□□□□ -1.01
TRAPPC12-218ENST00000479897 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
TRAPPC12-218ENST00000479897 DNAJC30Q96LL9 226 aa8.76□□□□□ -1.01
TRAPPC12-218ENST00000479897 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 PPP1R17O96001 155 aa8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 TCTAP57738 103 aa8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 NIT2Q9NQR4 276 aa8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 LAMTOR2Q9Y2Q5 125 aa8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 KLK5Q9Y337 293 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 STARD9Q9P2P6 4700 aa8.75□□□□□ -1.01
TRAPPC12-218ENST00000479897 A0A0J9YY99 117 aa8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 PHOX2AO14813 284 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms