RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 TRBV27A0A0K0K1C4 114 aa9.76□□□□□ -0.85
LYSMD4-206ENST00000479791 SOCS3O14543 225 aa9.76□□□□□ -0.85
LYSMD4-206ENST00000479791 LY6HO94772 140 aa9.76□□□□□ -0.85
LYSMD4-206ENST00000479791 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
LYSMD4-206ENST00000479791 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
LYSMD4-206ENST00000479791 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 IGHV1-69P01742 117 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 SUMO4Q6EEV6 95 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 A0A0J9YX75 114 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 TRBV30A0A0K0K1B3 111 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 MUSTN1Q8IVN3 82 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 LINC01560Q8TB33 94 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 CSMD1Q96PZ7 3565 aa9.75□□□□□ -0.85
LYSMD4-206ENST00000479791 TRAV2A0A0B4J234 112 aa9.74□□□□□ -0.85
LYSMD4-206ENST00000479791 TRAV8-4A0A0B4J246 113 aa9.74□□□□□ -0.85
LYSMD4-206ENST00000479791 TRBV6-5A0A0K0K1A5 114 aa9.74□□□□□ -0.85
LYSMD4-206ENST00000479791 SDHAF1A6NFY7 115 aa9.74□□□□□ -0.85
LYSMD4-206ENST00000479791 CNOT1A5YKK6 2376 aaKnown RBP9.74□□□□□ -0.85
LYSMD4-206ENST00000479791 CCDC179H3BU77 68 aa9.74□□□□□ -0.85
LYSMD4-206ENST00000479791 Q8NA96 180 aa9.74□□□□□ -0.85
LYSMD4-206ENST00000479791 H7C2G1 150 aa9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 MRPL23Q16540 153 aaKnown RBP9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 TEX49A0A1B0GTD5 131 aa9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 M0R2P5 195 aa9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 ELANEP08246 267 aa9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 Q1RN00 199 aa9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 PRR30Q53SZ7 412 aaPredicted RBP9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 FAM110AQ9BQ89 295 aa9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 SIRPDQ9H106 197 aa9.73□□□□□ -0.85
LYSMD4-206ENST00000479791 H3BMM0 161 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 LGALS9O00182 355 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 TCF15Q12870 199 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 C15orf53Q8NAA6 179 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 UBE2WQ96B02 151 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 FAM223BA6NKX1 122 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 RHOHQ15669 191 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 NSUN5P1Q3KNT7 163 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 FAM223AQ8IWN6 122 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 APC2O95996 2303 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 MUC4Q99102 2169 aa9.72□□□□□ -0.85
LYSMD4-206ENST00000479791 IGHV4-39P01824 125 aa9.71□□□□□ -0.85
LYSMD4-206ENST00000479791 ZNF22P17026 224 aaPredicted RBP9.71□□□□□ -0.85
LYSMD4-206ENST00000479791 UBE2E1P51965 193 aa9.71□□□□□ -0.85
LYSMD4-206ENST00000479791 DEFB1P60022 68 aa9.71□□□□□ -0.85
LYSMD4-206ENST00000479791 DEFB104AQ8WTQ1 72 aa9.71□□□□□ -0.85
LYSMD4-206ENST00000479791 JPT2Q9H910 190 aa9.71□□□□□ -0.85
LYSMD4-206ENST00000479791 F5H697 171 aa9.71□□□□□ -0.86
LYSMD4-206ENST00000479791 NDUFA4O00483 81 aa9.71□□□□□ -0.86
LYSMD4-206ENST00000479791 TRIAP1O43715 76 aa9.71□□□□□ -0.86
LYSMD4-206ENST00000479791 ZFP36P26651 326 aaKnown RBP9.71□□□□□ -0.86
LYSMD4-206ENST00000479791 MDFICQ9P1T7 246 aa9.71□□□□□ -0.86
LYSMD4-206ENST00000479791 FAM159AQ6UWV7 190 aa9.7□□□□□ -0.86
LYSMD4-206ENST00000479791 MAP1BP46821 2468 aaKnown RBP9.7□□□□□ -0.86
LYSMD4-206ENST00000479791 A0A087WWL8 130 aa9.7□□□□□ -0.86
LYSMD4-206ENST00000479791 KLLNB2CW77 178 aa9.7□□□□□ -0.86
LYSMD4-206ENST00000479791 CFAP161Q6P656 301 aa9.7□□□□□ -0.86
LYSMD4-206ENST00000479791 UNQ9165/PRO28630Q6UXU0 137 aa9.7□□□□□ -0.86
LYSMD4-206ENST00000479791 A0A0J9YXY3 114 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 F6UB75 175 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 H3BT86 120 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 ABCA4P78363 2273 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 FAM240AA0A1B0GVK7 77 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 C2orf82Q6UX34 121 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 C5orf56Q8N8D9 126 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 MGAQ8IWI9 3026 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 C19orf54Q5BKX5 351 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 DEFB123Q8N688 67 aa9.69□□□□□ -0.86
LYSMD4-206ENST00000479791 SAA4P35542 130 aa9.68□□□□□ -0.86
LYSMD4-206ENST00000479791 FBXL19-AS1Q494R0 122 aa9.68□□□□□ -0.86
LYSMD4-206ENST00000479791 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
LYSMD4-206ENST00000479791 ZNF256Q9Y2P7 627 aaPredicted RBP9.68□□□□□ -0.86
LYSMD4-206ENST00000479791 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
LYSMD4-206ENST00000479791 C11orf71Q6IPW1 123 aa9.68□□□□□ -0.86
LYSMD4-206ENST00000479791 BEX4Q9NWD9 120 aaPredicted RBP9.68□□□□□ -0.86
LYSMD4-206ENST00000479791 H7C423 109 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 BSNQ9UPA5 3926 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 M0QY20 66 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 COX6CP09669 75 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 LITAFQ99732 161 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 ICOSQ9Y6W8 199 aa9.67□□□□□ -0.86
LYSMD4-206ENST00000479791 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 GRNP28799 593 aaKnown RBP9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 LAMA5O15230 3695 aa9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 HERV-K104P63124 156 aa9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 SPANXCQ9NY87 97 aa9.66□□□□□ -0.86
LYSMD4-206ENST00000479791 IGLV4-3A0A075B6K6 122 aa9.65□□□□□ -0.86
LYSMD4-206ENST00000479791 IGHV3-30-3P0DP02 117 aa9.65□□□□□ -0.86
LYSMD4-206ENST00000479791 C9orf85Q96MD7 179 aa9.65□□□□□ -0.86
LYSMD4-206ENST00000479791 PIEZO2Q9H5I5 2752 aa9.65□□□□□ -0.86
LYSMD4-206ENST00000479791 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
LYSMD4-206ENST00000479791 FOXC1Q12948 553 aa9.65□□□□□ -0.86
LYSMD4-206ENST00000479791 FAM74A4Q5TZK3 123 aa9.65□□□□□ -0.86
LYSMD4-206ENST00000479791 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms