RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SERF2P84101 59 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 FABP9Q0Z7S8 132 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 GUK1Q16774 197 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 SP6Q3SY56 376 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 SCGB2B2Q4G0G5 96 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 FAM74A1Q5RGS3 127 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 AADACL3Q5VUY0 350 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 ZNF818PQ6ZRF7 136 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 TTC9CQ8N5M4 171 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 MIR7-3HGQ8N6C7 128 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 MBD3L1Q8WWY6 194 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 RMI2Q96E14 147 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 TVP23CQ96ET8 276 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 ACY3Q96HD9 319 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 GPR82Q96P67 336 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 PFDN5Q99471 154 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 PSMG3Q9BT73 122 aaPredicted RBP2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 FAM103A1Q9BTL3 118 aaKnown RBP2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 GGACTQ9BVM4 153 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 SLC2A9Q9NRM0 540 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 DNAH9Q9NYC9 4486 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 LOC102724200A0A096LPH7 203 aaPredicted RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TRBV7-1A0A0A6YYK4 115 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 IGLC7A0M8Q6 106 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 MEIS3P1A6NDR6 274 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 RBFOX3A6NFN3 312 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 H0Y980 276 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 UPK2O00526 184 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 S1PR2O95136 353 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 IFNA1P01562 189 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 IGKV1-39P01597 117 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 IGKV1D-39P04432 117 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TYMSP04818 313 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 METTL15P1P0C7V9 234 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 AKR1C4P17516 323 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 FXYD4P59646 89 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 RANP62826 216 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 RHOGP84095 191 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 JOSD1Q15040 202 aaPredicted RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 IAH1Q2TAA2 248 aaPredicted RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 ACOT6Q3I5F7 207 aaPredicted RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 C10orf55Q5SWW7 151 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 FAM104BQ5XKR9 115 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 RPL7L1Q6DKI1 246 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 SLC25A34Q6PIV7 304 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TOMM20LQ6UXN7 152 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 LYPD1Q8N2G4 141 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR1L8Q8NGR8 309 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 ORAOV1Q8WV07 137 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 LSM10Q969L4 123 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM56Q96MV1 263 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR4C12Q96R67 309 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 HINT2Q9BX68 163 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 COMMD5Q9GZQ3 224 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 C11orf1Q9H5F2 150 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 NAA60Q9H7X0 242 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM14BQ9NUH8 114 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 FKBP11Q9NYL4 201 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 PRO0628Q9UI54 55 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 PRNDQ9UKY0 176 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TIMM9Q9Y5J7 89 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM56-RWDD3S4R434 201 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 STAB2Q8WWQ8 2551 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 TENM3Q9P273 2699 aa2.17□□□□□ -2.06
CDC42BPA-212ENST00000478573 C16orf90A8MZG2 172 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 CORTO00230 105 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 TCAPO15273 167 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 PGLYRP1O75594 196 aaPredicted RBP2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 PMP2P02689 132 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 SRP19P09132 144 aaKnown RBP2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 LINC00614P0C842 121 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 DDTP30046 118 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 RPL19P84098 196 aaKnown RBP2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 PRCDQ00LT1 54 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 ATP5G2Q06055 141 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 PMVKQ15126 192 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 ELOBQ15370 118 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 PSG3Q16557 428 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM241Q24JQ0 296 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 PYY3Q5JQD4 70 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 ACTL10Q5JWF8 245 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 CLEC19AQ6UXS0 136 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 FAM19A1Q7Z5A9 133 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 GPHB5Q86YW7 130 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 HIST3H2BBQ8N257 126 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 LINC00337Q8N6G1 96 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR51H1Q8NH63 302 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 DYNLRB2Q8TF09 96 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 CASTOR1Q8WTX7 329 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 TM2D3Q9BRN9 247 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 EIF5A2Q9GZV4 153 aaKnown RBP2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM222Q9H0R3 208 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 SND1-IT1Q9HBX3 110 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 NDUFA4L2Q9NRX3 87 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 LYRM2Q9NU23 88 aaPredicted RBP2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 DOK5Q9P104 306 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 U3KQK5 164 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 ARL2-SNX15V9GYD0 113 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms