RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 LLPHQ9BRT6 129 aaKnown RBP-0.47□□□□□ -2.48
HPS3-205ENST00000478525 UFC1Q9Y3C8 167 aa-0.47□□□□□ -2.48
HPS3-205ENST00000478525 CCDC171Q6TFL3 1326 aa-0.47□□□□□ -2.48
HPS3-205ENST00000478525 FLGP20930 4061 aaPredicted RBP-0.47□□□□□ -2.49
HPS3-205ENST00000478525 MXRA5Q9NR99 2828 aa-0.47□□□□□ -2.49
HPS3-205ENST00000478525 ZNF609O15014 1411 aa-0.47□□□□□ -2.49
HPS3-205ENST00000478525 UHRF1BP1LA0JNW5 1464 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 URB1O60287 2271 aaKnown RBP-0.48□□□□□ -2.49
HPS3-205ENST00000478525 PKHD1P08F94 4074 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 BORCS7-ASMTA0A0B4J1R7 106 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 TRBV7-6A0A0J9YX20 115 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 CXorf51AA0A1B0GTR3 108 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 TRDV1A0A1B0GX56 115 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 K7EQZ3 153 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 CDC42EP2O14613 210 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 UQCRQO14949 82 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 HBDP02042 147 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 CYBAP13498 195 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 CCL3L1P16619 93 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 PSPHP78330 225 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 REEP5Q00765 189 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 PIGYQ3MUY2 71 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 OR51A4Q8NGJ6 313 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 COX7B2Q8TF08 81 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 GINS3Q9BRX5 216 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 CCDC32Q9BV29 185 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 OTORQ9NRC9 128 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 ARHGAP31Q2M1Z3 1444 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 A2MP01023 1474 aa-0.48□□□□□ -2.49
HPS3-205ENST00000478525 ATRQ13535 2644 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 LRP5O75197 1615 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 DNAJC13O75165 2243 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 CRYGSP22914 178 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 PCBD1P61457 104 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 OR2T2Q6IF00 324 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 SLC25A26Q70HW3 274 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 OTOSQ8NHW6 89 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 DYNLRB2Q8TF09 96 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 DYDC1Q8WWB3 177 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 PARVGQ9HBI0 331 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 METTL1Q9UBP6 276 aaKnown RBP-0.49□□□□□ -2.49
HPS3-205ENST00000478525 HIVEP1P15822 2718 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 ARAP1Q96P48 1450 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 HERC2O95714 4834 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 WDR97A6NE52 1622 aa-0.49□□□□□ -2.49
HPS3-205ENST00000478525 LRRC37A2A6NM11 1700 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 GVINP1Q7Z2Y8 2422 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 E7EQ34 232 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 GABARAPH6UMI1 98 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 IFNA17P01571 189 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 RBP4P02753 201 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 RPL22P35268 128 aaKnown RBP-0.5□□□□□ -2.49
HPS3-205ENST00000478525 SPRR2AP35326 72 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 DCUN1D2Q6PH85 259 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 DHRS4L2Q6PKH6 230 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 BAGE3Q86Y29 109 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 TEX29Q8N6K0 151 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 FKBP11Q9NYL4 201 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 STOML2Q9UJZ1 356 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 USH2AO75445 5202 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 PCF11O94913 1555 aaKnown RBP-0.5□□□□□ -2.49
HPS3-205ENST00000478525 LRRC37A3O60309 1634 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 IFT172Q9UG01 1749 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 SBF2Q86WG5 1849 aa-0.5□□□□□ -2.49
HPS3-205ENST00000478525 SETD2Q9BYW2 2564 aaPredicted RBP-0.51□□□□□ -2.49
HPS3-205ENST00000478525 TGP01266 2768 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 TRGV1A0A0A0MS02 117 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 LOC107984640A0A0U1RRK4 108 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 PPP5D1E7EU14 171 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 TECPR2O15040 1411 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 SMIM24O75264 130 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 CSN2P05814 226 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 CTXN2P0C2S0 81 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 COX6B1P14854 86 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 S100A11P31949 105 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 MT4P47944 62 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 ERVS71-1P61550 626 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 GOLGA4Q13439 2230 aaKnown RBP-0.51□□□□□ -2.49
HPS3-205ENST00000478525 ROCK1Q13464 1354 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 SPCS2Q15005 226 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 LTC4SQ16873 150 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 FAM135BQ49AJ0 1406 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 PPP1R2P3Q6NXS1 205 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 C10orf71Q711Q0 1435 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 ATP6V0E2Q8NHE4 81 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 SMIM4Q8WVI0 70 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 SLC35B3Q9H1N7 401 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 BOLA2Q9H3K6 86 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 SPANXCQ9NY87 97 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 ATPIF1Q9UII2 106 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 NDUFAF1Q9Y375 327 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 WDR7Q9Y4E6 1490 aa-0.51□□□□□ -2.49
HPS3-205ENST00000478525 PCNX1Q96RV3 2341 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 GOLGA3Q08378 1498 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 IQSEC2Q5JU85 1478 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 ZFYVE9O95405 1425 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 MED23Q9ULK4 1368 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 A6NIN4 97 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 M0R2T5 61 aa-0.52□□□□□ -2.49
HPS3-205ENST00000478525 HSD11B1P28845 292 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms