RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 TRPM7Q96QT4 1865 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 SCAPERQ9BY12 1400 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 TRBV6-4A0A1B0GX49 114 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 NUPR2A6NF83 97 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 H3BQ15 152 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 H3BRM9 83 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 SSSCA1O60232 199 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 CCKP06307 115 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 LINC00032P0C843 101 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 ATP5EP56381 51 aaPredicted RBP1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 FAM74A1Q5RGS3 127 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 IFI27L1Q96BM0 104 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 CDC42SE1Q9NRR8 79 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 LINC00474Q9P2X8 69 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 C22orf24Q9Y442 160 aa1.61□□□□□ -2.15
SMARCA1-204ENST00000478420 KIAA0100Q14667 2235 aaKnown RBP1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 KIAA1551Q9HCM1 1747 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 BAZ1AQ9NRL2 1556 aaPredicted RBP1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 DOCK10Q96BY6 2186 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 IGKV3-7A0A075B6H7 116 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 A0A0J9YY99 117 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 TRBV10-1A0A0K0K1A3 114 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 TRBV10-3A0A0K0K1G6 114 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 A6NIN4 97 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 GNGT2O14610 69 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 Q0VG73 95 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 Q6ZRN7 208 aaPredicted RBP1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 REG4Q9BYZ8 158 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 MRPL35Q9NZE8 188 aaKnown RBP1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 CCDC18Q5T9S5 1454 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 ARHGAP35Q9NRY4 1499 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 RTTNQ86VV8 2226 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 ANK1P16157 1881 aa1.6□□□□□ -2.15
SMARCA1-204ENST00000478420 MUC22E2RYF6 1773 aaPredicted RBP1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 CHD3Q12873 2000 aaKnown RBP1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 GAPVD1Q14C86 1478 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 TRAV13-2A0A0B4J235 113 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 TRAV12-3A0A0B4J271 114 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 PIGBOS1A0A0B4J2F0 54 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 HCG22E2RYF7 251 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 NUPR1O60356 82 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 PPYP01298 95 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 IGLV3-1P01715 115 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 LINC00299Q6ZSB3 139 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 COA5Q86WW8 74 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 DMAC1Q96GE9 116 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 ATG5Q9H1Y0 275 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 NPVFQ9HCQ7 196 aa1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 MRPL36Q9P0J6 103 aaKnown RBP1.59□□□□□ -2.15
SMARCA1-204ENST00000478420 CACNA1GO43497 2377 aa1.59□□□□□ -2.16
SMARCA1-204ENST00000478420 BAZ2BQ9UIF8 2168 aaKnown RBP1.59□□□□□ -2.16
SMARCA1-204ENST00000478420 UNC13CQ8NB66 2214 aa1.59□□□□□ -2.16
SMARCA1-204ENST00000478420 ANKRD36BQ8N2N9 1353 aa1.59□□□□□ -2.16
SMARCA1-204ENST00000478420 MPDZO75970 2070 aa1.59□□□□□ -2.16
SMARCA1-204ENST00000478420 HEATR1Q9H583 2144 aaKnown RBP1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 LAMB1P07942 1786 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 TRBV6-5A0A0K0K1A5 114 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 hADV29S1A0JD25 119 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 IGHV3-30P01768 117 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 IGHV3-30-5P0DP03 117 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 CCL8P80075 99 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 NDUFA11Q86Y39 141 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 C15orf53Q8NAA6 179 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 PHIPQ8WWQ0 1821 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 FN1P02751 2386 aaKnown RBP1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 SHROOM2Q13796 1616 aa1.58□□□□□ -2.16
SMARCA1-204ENST00000478420 GOLGA3Q08378 1498 aa1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 PLEKHH2Q8IVE3 1493 aa1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 PLXNA2O75051 1894 aa1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 JMJD7-PLA2G4BH0Y9G9 81 aa1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 PDE6GP18545 87 aa1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 FAM213BQ8TBF2 198 aa1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 LCN9Q8WX39 176 aa1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 KDM5AP29375 1690 aaKnown RBP1.57□□□□□ -2.16
SMARCA1-204ENST00000478420 CTTNBP2Q8WZ74 1663 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 SIX6O95475 246 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 UBE2D1P51668 147 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 GNG11P61952 73 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 MPV17LQ2QL34 196 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 TSLPQ969D9 159 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 PMCHL2Q9BQD1 86 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 WFDC10AQ9H1F0 79 aa1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 CDK12Q9NYV4 1490 aaPredicted RBP1.56□□□□□ -2.16
SMARCA1-204ENST00000478420 MYOFQ9NZM1 2061 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 TOPAZ1Q8N9V7 1692 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 ICE1Q9Y2F5 2266 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 ARAP2Q8WZ64 1704 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 H3BQF6 201 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 J3QKU1 62 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 DNAL4O96015 105 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 CYP4F30PQ9H0H9 118 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 FREM1Q5H8C1 2179 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 SHANK2Q9UPX8 1470 aa1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 PRDM15P57071 1507 aaPredicted RBP1.55□□□□□ -2.16
SMARCA1-204ENST00000478420 ABCA3Q99758 1704 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 CEP192Q8TEP8 1941 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 TEX49A0A1B0GTD5 131 aa1.54□□□□□ -2.16
SMARCA1-204ENST00000478420 CLPSL1A2RUU4 121 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms