RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CCL3L1P16619 93 aa9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 CTSZQ9UBR2 303 aa9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 SPTBN1Q01082 2364 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-207ENST00000477573 GP9P14770 177 aa9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 RPL18AQ02543 176 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 THAP8Q8NA92 274 aa9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 NEXN-AS1Q8NBZ9 246 aa9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 CYSTM1Q9H1C7 97 aa9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 RNASE2P10153 161 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 C1orf229Q6ZS94 237 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 ZNF833PQ6ZTB9 187 aa9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 LINC00311Q8N616 119 aa9.67□□□□□ -0.86
RTFDC1-207ENST00000477573 TRAV12-2A0A075B6T6 113 aa9.66□□□□□ -0.86
RTFDC1-207ENST00000477573 NDUFC2O95298 119 aa9.66□□□□□ -0.86
RTFDC1-207ENST00000477573 SUB1P53999 127 aaKnown RBP eCLIP9.66□□□□□ -0.862e-7■■■■□ 25.1
RTFDC1-207ENST00000477573 NPC2P61916 151 aa9.66□□□□□ -0.86
RTFDC1-207ENST00000477573 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
RTFDC1-207ENST00000477573 TRAV41A0A0B4J266 112 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 IGHV4-39P01824 125 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 PRR25Q96S07 402 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 TPSG1Q9NRR2 321 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 RELNP78509 3460 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 LYNX1G3V0Z9 82 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 UPK2O00526 184 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 LYNX1P0DP58 116 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 GNLYP22749 145 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 ITLN2Q8WWU7 325 aaPredicted RBP9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 PEMTQ9UBM1 199 aa9.65□□□□□ -0.86
RTFDC1-207ENST00000477573 IGHV1-8P0DP01 117 aa9.64□□□□□ -0.87
RTFDC1-207ENST00000477573 C11orf71Q6IPW1 123 aa9.64□□□□□ -0.87
RTFDC1-207ENST00000477573 CNFNQ9BYD5 112 aa9.64□□□□□ -0.87
RTFDC1-207ENST00000477573 SERP1Q9Y6X1 66 aa9.64□□□□□ -0.87
RTFDC1-207ENST00000477573 CRIP1P50238 77 aa9.64□□□□□ -0.87
RTFDC1-207ENST00000477573 PAPPA-AS1Q5QFB9 102 aa9.64□□□□□ -0.87
RTFDC1-207ENST00000477573 C10orf105Q8TEF2 133 aa9.64□□□□□ -0.87
RTFDC1-207ENST00000477573 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
RTFDC1-207ENST00000477573 TMEM14CQ9P0S9 112 aa9.63□□□□□ -0.87
RTFDC1-207ENST00000477573 COX6CP09669 75 aa9.63□□□□□ -0.87
RTFDC1-207ENST00000477573 Q1RN00 199 aa9.63□□□□□ -0.87
RTFDC1-207ENST00000477573 A0A1W2PRX2 142 aa9.62□□□□□ -0.87
RTFDC1-207ENST00000477573 MLANAQ16655 118 aa9.62□□□□□ -0.87
RTFDC1-207ENST00000477573 ZNRD1Q9P1U0 126 aa9.62□□□□□ -0.87
RTFDC1-207ENST00000477573 ACACBO00763 2458 aa9.62□□□□□ -0.87
RTFDC1-207ENST00000477573 IGKV1D-37A0A075B6S9 117 aa9.61□□□□□ -0.87
RTFDC1-207ENST00000477573 IGKV1-16P04430 117 aa9.61□□□□□ -0.87
RTFDC1-207ENST00000477573 COX8CQ7Z4L0 72 aa9.61□□□□□ -0.87
RTFDC1-207ENST00000477573 MALRD1Q5VYJ5 2156 aa9.61□□□□□ -0.87
RTFDC1-207ENST00000477573 APRG1Q8IVJ8 170 aa9.61□□□□□ -0.87
RTFDC1-207ENST00000477573 TRBV7-1A0A0A6YYK4 115 aa9.6□□□□□ -0.87
RTFDC1-207ENST00000477573 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
RTFDC1-207ENST00000477573 ERHP84090 104 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-207ENST00000477573 LYPD1Q8N2G4 141 aa9.6□□□□□ -0.87
RTFDC1-207ENST00000477573 LRBAP50851 2863 aa9.6□□□□□ -0.87
RTFDC1-207ENST00000477573 TRIAP1O43715 76 aa9.6□□□□□ -0.87
RTFDC1-207ENST00000477573 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
RTFDC1-207ENST00000477573 LST1O00453 97 aa9.59□□□□□ -0.87
RTFDC1-207ENST00000477573 SAA1P0DJI8 122 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-207ENST00000477573 C16orf95Q9H693 158 aa9.59□□□□□ -0.87
RTFDC1-207ENST00000477573 SMIM26A0A096LP01 95 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 EIF4EBP3O60516 100 aaPredicted RBP9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 LY6HO94772 140 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 PLGLAQ15195 96 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 VMA21Q3ZAQ7 101 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 ORMDL2Q53FV1 153 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 LY6G5BQ8NDX9 201 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 TOMM6Q96B49 74 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 IGLV1-47P01700 117 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 Q6ZS46 218 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 KLHL30-AS1Q8NEE0 82 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 DCANP1Q8TF63 244 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 SCGB3A1Q96QR1 104 aa9.58□□□□□ -0.88
RTFDC1-207ENST00000477573 SH2D1AO60880 128 aa9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 IL17RELQ6ZVW7 336 aa9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 DAND5Q8N907 189 aa9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 HRNRQ86YZ3 2850 aaPredicted RBP9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 BUB1B-PAK6H3BSN5 160 aa9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 H7C2G1 150 aa9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 TMEM167AQ8TBQ9 72 aa9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
RTFDC1-207ENST00000477573 M0R1W7 72 aa9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 MRPS36P82909 103 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 C16orf92Q96LL3 132 aa9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 IGSF10Q6WRI0 2623 aa9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 TNCP24821 2201 aa9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 A0A1W2PPR1 153 aa9.56□□□□□ -0.88
RTFDC1-207ENST00000477573 C19orf84I3L1E1 186 aa9.55□□□□□ -0.88
RTFDC1-207ENST00000477573 GAS8-AS1O95177 125 aa9.55□□□□□ -0.88
RTFDC1-207ENST00000477573 COX7A1P24310 79 aa9.55□□□□□ -0.88
RTFDC1-207ENST00000477573 LINC01561Q8N1V8 128 aa9.55□□□□□ -0.88
RTFDC1-207ENST00000477573 TIMM21Q9BVV7 248 aa9.55□□□□□ -0.88
RTFDC1-207ENST00000477573 NDUFA4L2Q9NRX3 87 aa9.55□□□□□ -0.88
RTFDC1-207ENST00000477573 CFAP46Q8IYW2 2715 aa9.54□□□□□ -0.88
RTFDC1-207ENST00000477573 RHOHQ15669 191 aa9.54□□□□□ -0.88
RTFDC1-207ENST00000477573 NRACQ8N912 160 aa9.54□□□□□ -0.88
RTFDC1-207ENST00000477573 IGHV1-3A0A0C4DH29 117 aa9.54□□□□□ -0.88
RTFDC1-207ENST00000477573 AVPP01185 164 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms